Statistics


Genome Statistics

NCBI TAXON ID Name of the Organism Organism Abbreviation Number of Scaffolds Assembled Genome Size Number of Genes No. of Gaps (Mb) Genome Source
890382 Albugo laibachii Nc14 Albla 3783
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32512390 13679
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12.0 ensemblgenomes
112090 Aphanomyces astaci Aphas 835
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75844385 19119
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3824.0 Broad
157072 Aphanomyces invadans Aphin 481
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71402472 15248
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4712 Broad
559515 Hyaloperonospora arabidopsidis Emoy2 Hyaar_Emoy2 3138
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82051642 14963
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7514.0 VBI
763924 Phytophthora capsici LT1534 Phyca_LT1534 917
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82682925 20378
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0.00984 JGI
4785 Phytophthora cinnamomi Phyci 1314
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77975568 26132
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8134 JGI
403677 Phytophthora infestans T30-4 Phyin_T30-4 4763
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224112247 20215
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13367.0 Broad
761204 Phytophthora parasitica INRA-310 Phypa_INRA-310 708
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82389172 20501
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1006 Broad
164328 Phytophthora ramorum Phyra 2576
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56513403 16134
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12 JGI
67593 Phytophthora sojae V.1 Physo 1810
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86027303 19028
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1129 JGI
67593 Phytophthora sojae V.5 Physo 83
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85824234 26664
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998 JGI
1223555 Pythium aphanidermatum DAOM BR444 Pytap_DAOMBR444 1774
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35876849 12306
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877 Pythium Genome Database
1223556 Pythium arrhenomanes ATCC 12531 Pytar_ATCC12531 10978
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44685521 13806
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784 Pythium Genome Database
1223557 Pythium irregulare DAOM BR486 Pytir_DAOMBR486 5887
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42968084 13805
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882 Pythium Genome Database
1223558 Pythium iwayamai DAOM BR242034 Pytiw_DAOMBR242034 11542
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43200612 14876
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902 Pythium Genome Database
431595 Pythium ultimum DAOM BR144 Pytul_DAOMBR144 973
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44909722 15296
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589 Pythium Genome Database
1223559 Pythium ultimum var. sporangiiferum BR650 Pytul_var.sporangiiferum 5482
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37631444 14087
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659 Pythium Genome Database
1223560 Pythium vexans DAOM BR484 Pytve_DAOMBR484 3685
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33844883 11959
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887 Pythium Genome Database
1156394 Saprolegnia diclina VS20 Sapdi_VS20 390
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62885792 17360
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1106 Broad
695850 Saprolegnia parasitica CBS 223.65 Sappa_CBS223.65 1442
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53093248 20114
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670 Broad
1642459 Phytophthora agathidicida Phyag 3701
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37340450 13367
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2751 NCBI
325452 Phytophthora kernoviae Phyke 1922
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36590891 12250
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1106 NCBI
1330343 Phytophthora pluvialis Phypl 4221
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53621061 16222
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4911 NCBI
596104 Phytophthora multivora Phymu 2762
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40062232 14303
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3040 NCBI
1690101 Phytophthora taxon totara Phyta_to 4314
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55580915 15718
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4543 NCBI
4781 Plasmopara halstedii Plaha 3,162
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75,321,785 15469
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8.527793 NCBI



GENE STATISTICS


Name of the Organism Gene Prefix Number of Genes Average Gene Length Average Number of Exons Average Exon Length
Albugo laibachii Nc14 Albla_Nc14 13679 1608 3.414 438.5
Aphanomyces astaci Aphas_ 19119 1879 3.94 366.17
Aphanomyces invadans Aphin_ 15248 1863 4.26 383.12
Hyaloperonospora arabidopsidis Emoy2 Hyaar_Emoy2 14963 1104 1.96 494.531
Phytophthora capsici LT1534 Phyca_LT1534 20378 1216.92 2.14 465.95
Phytophthora cinnamomi Phyci_ 26132 1301 2.096935248 534.836
Phytophthora infestans T30-4 Phyin_T30-4 20215 1401 2.8 428.16
Phytophthora parasitica INRA-310 Phypa_INRA-310 20501 1519 2.23 622.46
Phytophthora ramorum Phyra_ 16134 1673 2.64 553.294
Phytophthora sojae V.1 Physo_ 19028 1766.04 2.814664915 543.44
Phytophthora sojae V.5 Physo_ 26664 1415.56 2.38995062 493.49
Pythium aphanidermatum DAOM BR444 Pytap_DAOMBR444 12306 1618 2.333739441 629.11
Pythium arrhenomanes ATCC 12531 Pytar_ATCC12531 13806 1539 2.649692141 505.69
Pythium irregulare DAOM BR486 Pytir_DAOMBR486 13805 1706.265 2.879608837 518.933
Pythium iwayamai DAOM BR242034 Pytiw_DAOMBR242034 14876 1541.01 2.759411132 480.42
Pythium ultimum DAOM BR144 Pytul_DAOMBR144 15296 1502.26 2.622 501.264
Pythium ultimum var. sporangiiferum BR650 Pytul_var.sporangiiferum 14087 1493.71 3.67 310.713
Pythium vexans DAOM BR484 Pytve_DAOMBR484 11959 1765.84 2.928589347 537.28
Saprolegnia diclina VS20 Sapdi_VS20 17360 1742.44 4.54 363.13
Saprolegnia parasitica CBS 223.65 Sappa_CBS223.65 20114 1520.52 3.997014925 336.12
Phytophthora agathidicida Phyag_ 13367 1914.4 2.67 592.21
Phytophthora kernoviae Phyke_ 12250 2084.96 2.82 602.49
Phytophthora pluvialis Phypl_ 16222 2006.3 2.91 519.38
Phytophthora multivora Phymu_ 14303 1968.87 2.72 599.72
Phytophthora taxon totara Phyta_to 15718 2056.64 3.015 509.36
Plasmopara halstedii Plaha_ 15469 1341.098 2.605 1341.098


EST STATISTICS


Organism Name Total Number of ESTs Number of Contigs Number of Singlets
Albugo laibachii Nc14 38704 144 11997
Aphanomyces invadans 3602 89 553
Phytophthora capsici LT1534 56495 3306 4354
Phytophthora cinnamomi 1328 16 86
Phytophthora parasitica INRA-310 10525 935 1073
Pythium ultimum DAOM BR144 100391 6680 7914
Saprolegnia parasitica CBS 223.65 1513 37 264