Transcript Name :
Phypl_g7083
Location :
Scaffold_332 : 35391 - 36210
Orientation:
(-)
Number of Exons:
4
Description :
hypothetical protein PHYSODRAFT_518543
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
Profile scan predictionP-Valprediction_id
Ubiquitin-conjugating enzyme, E239.346PS50127
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote13.487PS50030
HMMSMART Prediction
HmmSmart predictionP-Valprediction_id
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote2.7SM00212
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote2.6SM00165
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
Interpro Domain nameprediction_id
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryoteIPR015940
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-195
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
*** None ***
Pathway
KO ID
K04649
Ortholog
*** None ***
Sequence
        820 bases(100 bases per row)
ATGGCTCCAGGTGAGCCGCGAAGGAGCAAAACGTCGCTAGAATAGCTGCTGATTCAACGCCGTCACTGCCGTAGCAGGTCGCGtgcgcaaggagctggag
gagtgCCAGAAGGACTCGCACCTGTCGGGCGTCACGGCCGTGCCGGTGGACGCCGAGTCGCTctcggagctgcgcggcTCTATCCAGGGGCCCGAGGCGA
CGCCGTACGAGGGCGGCcacttcgagctggagatcgtCATCCCGCCCAAGTACGtaactcgctgctgcatctgcggGCTTAATTGCTAGGTTTTAGATGC
TAATTCGTTGCTACCGGGGAACTTATTTAGGTACCCATTCGAGCCGCCGCAGATGCGCTTCCTCACCAAGATCTGGCACCCCAACATCTCGTCGCAGACG
GGGGCCATCTGCCTGGACATCCTCAAGGACGCGTGGTCTCCCGCGCTGACCatcaagacggcgctgctgtccatccaggcgctgctctcggcaGCTGAGC
CCACGGACCCGCaggacgccgaggtggccaagatgtacctccacgaccacgagcagTTCCTCAACACTGCGCGCTTCTGGACCGAGAGTTACGCCAAGCA
GACGGACacaggcgacgacgccgcgctctccAGACTCATGGACATGGGCTTCCCCGCTGTACGGGGGCTGCAATGTTTTAATTATTTTTTTCTCGAGATG
ATAGCGCTGAACAACACCATGTTTTGCTTCGTTATGCTGCAGGACAAGGCGAAGGCTGCACTGCAGGCGGCCAATGGCGATGAGAACGCTGCGATCGAAA
AgttggtcagcagcatgtAG