Transcript Name :
Phyra_g181
Location :
Orientation:
(+)
Number of Exons:
3
Description :
OWZ24106.1 RxLR effector protein [Phytophthora megakarya
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed

Functional Annotation
Profile scan prediction | P-Val | prediction_id |
---|---|---|
Ubiquitin domain | 20.697 | PS50053 |
HmmSmart prediction | P-Val | prediction_id |
---|---|---|
Ubiquitin domain | 8.8e-21 | SM00213 |
Inside | Outside | TMhelix | |
---|---|---|---|
1-691 |
Position | Context | Score | |
---|---|---|---|
173 | SRSRQRR|TA | 0.732 | |
284 | RHHRRNR|DG | 0.543 | |
297 | GRQRHGR|RS | 0.507 |
Biological Process | GO ID | Prediction Method |
---|---|---|
protein binding | GO:0005515 | IEA |
*** None *** |
*** None *** |
Sequence
2589 bases(100 bases per row) |
ATGGCCACGCCGACCGACCCGCTGTCGGAGCCTGCGGCCGAGCCTCCTGTGGCCGCAGAGGCCGCGCGACTATCGCTCAAGGTGCGCACACTGGATCAGA AGACGTACCCGATCACCATCTGCGCGGCCGCCTCTGTGCCGCAGCTCAAGGAGGTCGTGGCCGCCGAGACGGGCATCACACTGGCCCGCCAGAGACTCAT TTACCGTGGCCGAGTGCTCAAGAACGACCAGTCGCTGGCTGCGTACTCGCTGGAGGATGGCCACGTGCTGCACTTGGTGGTGCGTGCCGCTCCGCTGCCG TCTGCTGGCGTTGCTGCTGCCGGCCACGGATCGGCCGATTCTTCTGCTCCGGACGCTGATGCTGGCCAGGCTGGGCGAGCCTCTGACCACACTGCTGCTG CACACCAGTACTTGGCTACAGGATTCAGCTCAATGAACGGCATGGACGCGCTGAATGCGCGGCTGGACGAGTTGCAGAGACTGTCTCAACGCGCGCGGTC GAGATCGCGTCAACGTCGAACAGCTCGTATGCCGCTGCCGCCGACAGATAATGATGAACCTGACCCGACCATGGGACGCCCGGGCGGTGGAATCCCCAGC CGCGTGCTCATGGGCGCTACCATTTCGGTGCCTGAAGGGGCCAATGTTACCATGCCCTTCCTCAGCTCCATGATCGCCAACCTTGTCACGCAGGTTCATG AAGGTGGCGTGGAAGGCGAAGGAGTGACGACAGGAACCGCTGCAGATGGACGACATCATGTGTCGTTCTCGAGTGAGGCCCTGGGTGGGGTCGCTGCTGC TGAAATGGGAGCGACCGCGGCGAGAGCGCTGCGCCACCACCGCCGGAATCGCGATGGATCGGGTAGTACGGGACGTCAACGCCATGGGCGACGTTCTTTT ACTGGTGCTGGGCGTCAGGAAGCTTTGCGAGTTCGTACGGGTGTACTGTTCGCGTCGATGCGTGCGACGCTGGATGACGCGTCTCTCAATTTCCCAGCCG AGCTCGCCGCACTGCCGCAAGGAGGGGACAATGCAGCTATGGCAGAACTGCAGCAGCAAGTGGAAATGCTGCTAACGCTGCTGGAGCGGTTTGGGCCACG ACTTCGCCTTCTTCCTGCTGCGCTTGCCCAGCGAGACCGTCTGACTGAGCGCTCTGCTCTAGCGGCTAGTGGTACGGCGCCAGTTGAGTCAGCTTCAGGC AGCAGTAGCACACCCAACACGACCAATGACCCAGCAGAGCCAACAGTATCAACACGCCATGTGATTCGTGCGATCGAGACGCTGCAATCGATCGGAGAGG CCACTGACTTGCTGGCGCGCATGGTGCGCCATGCGTTTGTTCACCAACCCATACAGTTGCGCGAACCCATTCCGTTCCGTGAAGATGCTGCCGGTGCTGC GAATTTAGGTGCTACTATTGCTGGTGACGGAGTAGATGCCGCGATGCAAGCAGCGAGTCGCACTGCAGGTGCTCACGCTACTACTGGTGACAGAGTGATT GCTGCGATGCATGCAGCTGCACGAAGCGAAGGAGGTGTTCGACCTCGGTTTCGAGTGTCTCGAGTCAGGGCTATGGATCTGCTGGGCGAACGAACTATTA CAGCGTCGAGAACGGGCAACACTGCTCCAGGATCGACCCCAGGCTTCCCAGTAGATCTAACGGGCTCTTCTACTCGTGCAGCGCCACCGGTGCCCCAGTT GGCAACTTCCGCAGATAGCAGTCGACCAAACACGCGAGCTGATGCAGCTCCAAACAATAGTATGGATCCTCAACTGCCTGCAGGTGCGCGCATCTCGATT CCGGGCATCGGTGGACTGCCTCTCATGTCTTCGGTAGTGTTCCCATACTCTCTGGCAGCCGGCCTAGGCGGTAGCCATGCTACTACGACCTGGAACCTGG CGGATTTTGTAAGCCGGCTAACCAGTGAGCTGCCAATTTCCACTATCTACGGAGTCATGGCGGGTGATGCCACCCATCTACACCAGATCATGGCGCACAT TGGCTTCGCTTTGTTCAGCGGCGTTGACGTTCCGCGGATATCAAGACCGAACCTTCGTGCTTGGGCCCAAGACCTTGTAGACGAACTCCGCCGTTTGTTG CGCTCGAATGCGCTGCCTGCAGACGTGCTGGATCAAGTGAATGGAGAGACTGAGCGACGCTCAGCGCTGGGGAACGAGCTTCTTCGTGTTATGGAGCCGT TTATCCCTGACCTCATCGACTACCTCGTCCGTGCCACGTCAGCTAGTCGGGTCGCTGCATTTGGAACCAGCAGCTCAACATTTTTGCGTACAATGGTCCG GCAAGTTGTCCACCAACTCCGTTCCTACGCAAGAGACTCGACAGAATCCGAAGACGAGAGCGACGAGCGATTGAAGCGTCTGCTGCGAGGACTACTAATC TGGTTCGGCATGAACGAGCACATGGCGGGCTTTGTCGTTGACAGTCTTCTATGCTGGACTGAAGGAGATGGCGCTTCAAGTCGTCGCGGACGTACGCGCC AACGCGAGGACGCTACTAGCGGAGCTGGTGCTACTGACTCGTCTGCAACCAAGCGGCGACGTGAGTAAGACGTCAAAGGAGCTGCTGTA |