Transcript Name :
Phyra_g4866
Orientation:
(+)
Number of Exons:
4
Description :
hypothetical protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Gene Model plot
Functional Annotation
*** None ***
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Profile scan predictionP-Valprediction_id
Ribonuclease H domain8.655PS50879
Integrase, catalytic core20.652PS50994
*** None ***
*** None ***
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InsideOutsideTMhelix
1-31
32-54
55-622
*** None ***
PositionContextScore
378LSYRAAR|DA0.592
*** None ***
GO
Biological ProcessGO IDPrediction Method
nucleic acid bindingGO:0003676IEA
RNA-DNA hybrid ribonuclease activityGO:0004523IEA
DNA integrationGO:0015074IEA
*** None ***
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Sequence
        2248 bases(100 bases per row)
ATGCAATACCATGATGACAAGTTGCACCCGGTTCGATTTTGTGGCCGAGTCCTCAAGGACGCCGAGATGAACTACCACCCGGCCGAGAAGGAGGTCTTAG
CGCTACTGCTGGTGCTACTCCCAGTTGGTGGGTCGGACCATCCACGTCTATACGCGTTTTTCGACGCTCGAATGGGTGCACAAATCTAAGACACTGTTCG
GTCGAGCGACCCACTTTGTGGTTATGTTGTCCCCGTGGCACCTGGTGGTCAACCGAGTCAAGGAACGCGATTGCACGTTTGCCCAGCTTCTACAAGCTGG
CCTCACAAGCTTCGTGGAATTGGAAGACTCGTTGGCCCCGGTTACACCGCCGACGAAAGGGTCACCTACTGCTCGTATGGACCCCCACTTGCTTTATGCC
TGCCTACCGAGGTCCTATACCGGATTTGTGATGTCGTTCGATGGTTCGGCCAAGACCGAAAAGAACGGTGAATATGGCAGTTGCTCGTGGATTTTGTGGA
AATTACCAGAATGGACGGTAGTGACGGCTGCGAGTGCTTATCTCGAGACAACCACGGTAAACCTCGCCGAGTATGCTGGAATGAACAATGGCGTCTCGGC
TGCGCTCGAACATGGAGCCGAGGATTTAGTCATCGTTGGAGATTCGAGACTCGCAATCCAGCAGTCCCTAGGGGTGATGGCATGTCGAAAGGAGTCTCTG
ATGGTACAACTGAATCGTCACCGAGAGCTCACGACCAAGCTGCGGTCAGTGAAGTATTTGCACGTGGTCCGAGAGTTCAACGCTGCGGCAGATTCGTTGG
CGGGTGAGGCTCTCAGCAGCAAAGAATCCAGCGTAGCTGCGACTGAGGCTAGGAAATTAGAATTGGTCGAGCTGAACCGGATCGGAGAGGTCATCTATGA
ACCCTCAGTGCAGACCACGGCCGAAGAGAAACCGGCAGTCAGCTTCGCCCGAGCCAAGTAGCCCGTGGAATCTCCCGCGACAGATCTTTTTTCGACTTTG
TGCGGGACGAACCCGACTACCTAACTGCAACAACCAGAAACCAAGCAAAAGTGAGGAAGAAACGAGTCCAGTTTGCAGATGAAACGTCGGTGATAGAGCC
GAATGGTGCAGCTGAGCGAGACGAAGCGAATGATGTGACCACCGAAGCTCAGAGCGAGCTGGGAGCCGAGCAATCGAGCAACGAGGCGGACCCTGGCGCT
CCGAACGCAGAAGATGTTGACCCTGTGGTTATACAAGAAGAGCGCCGGAGACGAATCTCCGCCGCCCAGGATGAAGAGCTGAGATGGTCGAACCTAAAAG
CGGTCCTCCGAGGCAAGGAAACAGACCTCAGCTACAGAGCAGCCAGAGACGCTTGGAAGATGGCCGATAAGTTCGTGCTTAGCGAGGATGGTGTACTGTG
TTTTCTTGGAACGAACCGTCGGTGGGGCAACGAACGCCGAGAGGAAACAACGATGCGTCTAGTGGTGCCCACAACGATGATTCAAGAAGTACTACGGAGT
TGCCACGACTCGTTGGAAGGTGGCCACCAAGGTATCGGTCGAACGTACCACCGAGTCAAATCAGACTATTTTTGGATTGGACTATATGCAGACGCCGAAC
GACACGTCAAGTCCTGCTCCGACTGTAGTTCGAGCAAAAGTCGACCACAGTTCCGAGGCTATTCGCCAGGAAATGTCTTAGCAGAGCGACCGTTCCAGAT
GGTGTCGATGGATTTCGTCATACCGTTACCGAAGTCTCGTCGAGGCAACTCAGCCCTACTACTGTTCCAGTGCGCATTCACAGGATTCGTCATGGGTAAA
GCTATGTCGGACACCACCGCTCTGAAAGTCGCACAGGCTTTCGAGGAATGCGTGTACCGAAGATTCGGAGCACCAACTCTAATCCGACATGACCGAGACC
CTCGCTTCATGAGCGAGGTGTTCCAGGCCTTTGCAGAAATGATGCAGTCTCGGTCAAGAGCGACCCTGAGCTATCGGCCGCAGGCGAACGGACAACAAGA
GAGGTCGGTGAAGACGGTCATGCAATCGGTGCGGGTGTACGCAGAAGAACCGCTGCAGCAAGACTGGGACGAGATCGCGGAGCGATTGATCTTCGCTATC
AACAACTCTCAAGATGGCACCCGGAAGGACACTCCGTTTTACCTAGTTCATGGGTGGGACGCACAATCCACGCTGCGAGCGATGTCGGCATCACTCAAAC
GAGGATTCGGAGGCCAGACTGACGCATTGGCATGGCGCCGAGAAGTGA