Transcript Name :
Phyra_g2287
Location :
scaffold_30 : 172002 - 174344
Orientation:
(-)
Number of Exons:
1
Description :
hypothetical protein
This protein is a Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
Profile scan predictionP-Valprediction_id
Zinc finger, BED-type predicted9.767PS50808
HMMSMART Prediction
HmmSmart predictionP-Valprediction_id
Zinc finger, BED-type predicted0.0045SM00614
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
Y-scoreD-scoreY-pos
0.0630.0823
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-780
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
Biological ProcessGO IDPrediction Method
DNA bindingGO:0003677IEA
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        2342 bases(100 bases per row)
TGGTGAAGCGCGCACCCGCCAGTGCGGAATTCCTGTCGTCGCCGTCCACGCCTGCGGGCCATGCGAGCGGACCGGCCAGCGTGTCGGCCGTGTGGTCGTA
TTTTGAGAAGGACCAGAGCGGCAACTCCGTCTGCAAGTTTTGCGAGCGCGTGATCAAGGGCCACCACTCGTCCAACCTGCTCTCGCACCTGCGCACGGCC
GGGCGTACGGACCCCACACACCAGCAGGCCAACAACGTGTGCGAGGAGCACCGCGAGACCAAGCGCCACCTCAAGCGCCAAAAGATCGGGTTACAGGTTG
GCCAACAGACGGGCGCCGAGCTCGTCATGTACCCGCCGCCCTCGCAGGCTCTGGCTGCCGCTGTGGCCGCGGCCGGAGGCTCGCCCAGCATGTTCTCCGC
TGCACTCAAAAGAGACCCGACGGCAGCGCTCTATACGTACCCGCCGCCGGTGCTGACGAAGGAGCAGCGAGAGTCGCTGGGCTCGGCATATGGCGTGCAG
CCCGTACAGGTCAATTGCGAACAGTTTACACAGGATTTAGCTCTCATGGCCGTGGTAGACAACCTGCCCCTGAACTTCACGACGAAACCTGGGATGCAGT
ACGTCATGAACCAGTTGCTAGGAGAGAAGAAGCTCCCGCTGCCGAGTGAAGAGGCCGTGGGGAAGGCCGCCTTGCTGCTGCAGGAGAGCGTATTCGTGAC
CACCAAGATGGTGCTGACGAGGGCCAAGAGTGTGGCGGTGTCGCTCGAGGTGTGGCAGCACCCAACCCCCACAGAACCAAAGCCTACGCAGTACTTGGCA
GTGAAGATCCACTTCAGCGTCAACTTCCGGCTGTTTGATATTGCCGTCGGTGTCGCGCCGCTGGATGAGACACCTGGGCTAGAGACGATCAAGAGCATTC
TGGACTCGTATCTCGATCGCCTCGGTATAAAGGACAAGGTGATTGCCTGCGTCAAGGATGAGCTGCCAGCCAAGATTGAGCTGACGGCGGCCGATCTCCC
GTCACTTTTTGTGCCTGTTAACTTTGATGGGCGGCTTGTCTCGCCCGATGCAGCGCAGAGCACTTTCCTGCTTACGTCCGCGGTGCAGCACCTGCGTGTG
TGTTTGACGCAGAATGTATTCGCGAAGGCCTTTCCTGAGGTTGTCAATCAGATCGAGGAGTTTGTGGTGCGGTTAGCCGAAAATGAAGGAGCGATGCATT
CCCTCAGCCGCAAGTGCCCACTTCTCAACGTAGAGCTCTTTCCGGAAGGGCAAGAATCGATGTCTTATTACGAGTTTCTGCGCGACTTTCTCGAGCATTT
GCCCACACTGGAACAAATTGCGAACGCGAACCTTGTGGAGTACTTACCTGCACCGACTGTTGAGTTCATCGGGCTACTAGTGAAGAAATTGAGACCATTT
GCCCGATACTCAGAGGCGTTAGAAGGAGAAAAGAACAAGAAAACTGGTAGCGACAAGGAGGTGAACAAGAGCGGCATTTCCAGTATTTCAACGATTGCTG
CAGCCCTGGTGACGTACGCAGAGAAGCAAGCACAATCGGCTGTTGAGAGCGTGCCATCCCATCTAGGGCCAGTCACGTGGAAGCGCTTCTTCGATACGGT
GGCAAGGAAGCTGCGTGAGCAATTTGCAACGCTCCCAGCAGTGTGCTACGCGGCGACGCTCTTCGATCCGCGCTACAAGAACCGTGAGTATTGCTACTTG
TCTCCCAAGGCCGATTGCGAGATTGGGAAGGGTTTTCTCCGTCGAATGTTTACACCTGACGTAGCGCAGTCGTCCAATGCGACTGGGTCCTCAGGGCTGT
CTGGCGCAGATACCGCCTATGCAGAGCTGGTAAAAGAGGCCGCTAGCCCAACAGGCGGTGACTTGTCTCTCGAGGACGAGGAGGATGATCTGCTTTCGCA
TCTGCCGTCCGAGTCGTCGAAGTCATCATTACAAAGAGATAATGAGATGGTGGCAACCTGGGAAAAAGAGCTGAGCGCTTTTCTGAGTCTTCCTGCTTCG
GAGCGTAACGTGGACCCGTTGACGTGGTGGAAAACGAATCAGCTGCGGTTCCCATTGATCGCACCTTACGCTGAAATGGTGCTGTCGCTGCCGGCAGCGT
CCTCGAGTGGCGAGACTGTTCGGAAAAATATCTACAATGTGCTTCAGCGTACAGAAGGTGTTGCGCGCGAGGCCGCGCTGGCAGATAGCCCGGCTATGGT
AGAGACTTTCCTGTGCTTTCAGAAGAACAAAGAATACGCTTTGGAATGGTTTCGATCGGGTTCCAACAGCATGGTAGATGCTGTCGGTCTGAGTGACCTG
GAAAGCAACGCGGCGAGCTTCAAACATATCGAGAACGTGTGA