Transcript Name :
Physo_290724
Location :
Scaffold_14 : 33113 - 33641
Orientation:
(+)
Number of Exons:
2
Description :
conserved unknown protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-81
SECRETOME -- Non-signal Peptide Protein Secretion
NN-scoreoddsWeighted Score
0.8486.4660.013
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
TypeScore
nuclear478
GO
*** None ***
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        529 bases(100 bases per row)
TTTGCCGAGTGTGTCGGGGCTTGCGACCAGAGATCCAGACATGTACGCCGCTCAGCTCCGTTCCAAGGACGAGATCCTGGCCATCCGCGCCGCCGAGCGC
GAGTACGCCAAGCGCGTGCAGCTCGCGCAGGAGACGCTCAAGGTCGTGCGCGAGGAGCTGGCCACGTGCTACCGCGAGAACGGCGTGAACCACAAGATGG
CGTGCAAGGGCCTCCGCGACGAGTACGCCAAGCTCATCCAGGACCCCACCCACGGCGCTGGCTACCCGGTAGGTCATATACAAAGGAGTGGCGCTACGTT
GCCAGGGGTACGAGAGGAGAGAGAGGGAGAGACGCATGACTTACCGTATTTTATGTATGTTGGATGGCTGTGCAGACGCGACCGGAGTTCTAGACGCTGG
ATGGATACAGGACGAGCAGATTAAAGCGATATGTGGTCGGGAGCACAGCAGACACGGCCTGGAAAAGGAAAACATGACAGAAAAATGATGAAAATACATG
CGAACGAGAATCGCTGGTTGGTCATTGTC