Transcript Name :
Physo_131488
Orientation:
(+)
Number of Exons:
6
Description :
pol protein
This protein is Not Signal Peptide
This protein does Not have transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Gene Model plot
Functional Annotation
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Profile scan predictionP-Valprediction_id
Reverse transcriptase11.356PS50878
Integrase, catalytic core10.992PS50994
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GO
Biological ProcessGO IDPrediction Method
RNA bindingGO:0003723IEA
RNA-dependent DNA replicationGO:0006278IEA
DNA integrationGO:0015074IEA
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Sequence
        4603 bases(100 bases per row)
ATGGCAACGGCCGCGGCGCCCCAAACGCCCGCTTCGTCATCTGACGCGGAAACAAGACCCAAGCCGCTCATGTTGAGCGTGAAGACCTTCGAAGGCAAGG
AGGGTGAAAGCTTGATGCTTTGGACCCGTGAGGTTGAGATGGCTATGAGCTCAGCTCTACTCCGGACGGAGTCGCAGCGCGTGGCACTAGCTATCTCGAA
GCTCGATGGGCGAGCGAGAGAGTGGGCACTAACGTCCGGGACGTCGGACGAGGTGGCCTTCCCGACGTGGGACCAGCTGAAACAGCAATTGTCCCGAGTG
TTTGCCCAAACGAGGCGTATCGTGTGCGCTTACGCTTCCTGGCGACCAGGCAGAGCAAGAAGGAGTTGGTGACTATGTCCAAGAGTTGAGAACTCTCATT
GCTGGTATGTCTGCGGACCCCCTGCCGGAGGCAGTCACCGTTACGGTGTTCATGGAGGGCATCCGCACTAGCTTTACCAGGACGGAGGTGTTCCGAACCC
ACTCGAGCTCTTTAGAAGAGGCTGGGAGCGTCGCATTGAATGCGGAGCACAACTTTAAGCCGTCGAGACTTGGGTGGAATGCGTCTTACGCTAGCGCGTC
GAGTGGTCCGGAACCCATGGACCTCAGCTATGCTGAAGACGAAGAAGCCGAGCTTCGTGCTGCTGTGCAGCGTCGCGGTATGCACAGATGCTTCATCTGT
GGTGACACCCGTCACCTTCGTGCTGGGTGTCCGCTGCGCCATCAGCGCCAGGCTTCGTCAAGCCGCTCCTCGAGTTCGATCCAGGGCTCTGGTTTGTCTC
GGGGAAACGAGAAGTCCCAGTAGGCGCGGGGCGGCCTACTGGGGAAGAACTAAGTTCTATTGAGCCTCGGCGAGGTGGAGGTCGACAGGACTTAGCCCCG
AAGAGAGCCGTACTCTCTAACACGGAACGTGTATGCAAGCCGGGCTTGCTAGTTGTCCAAGCTTGGGTGAAGGGCTTCACCAAGCCATGGATGATTTTGA
TCGATTCGGGAGTGTCGGGTAACTACGCCCGGCGTTCTACGATGGACGGAAGTCAGCTTTATGCTGAGGCGCTGGTAGCGCGCGGAAGTGACATCGTCAC
TGTTCGTCTCGCGACGGGCACTCGTGTCACGGTGCCAAAGGTCCCTGTGGACCTGGGCGTGAAGTTTTTGGATTTTGATAGCGTTGAACGCTGTCTGGTC
TTAGACCTCGATTCGAGATATGATCTCATCCTTGGTATGGCGTGGCTGGAACGCCACGAGCCTTGAATCGATTGGAGGTCGAAGACCCTTGGTGCTACGC
ACTTCTCTCCTGGAGGAGCATTGGCGAGTCATGAACCCACCTCTGCTAGGAAGCAGAAGCGCTTTTGGCGCGAGCACTGGACCGAGTCGGTCAATGTGCT
GGACATCGGAGTTTCCGAGTTGGTGGACACTGAGTGTGTCGAGAACGAGCGTTCCGAGCGTGACTCGCGGACGGCAGGTGGAGCGGTACGAATTCCGCTG
AGCGGGCGTGCGTCTGAGGGCGACGCCCTGCTGCGTGCCGGTGAAGGCGCGGTCGACAGGAAGTCGAGTGAAGATGGGCGTTGCCCGGATCAAGGATGTG
GAGCGGCACTAATTCCGCTGAGCGGGCGTGCGTCTGAGGGCGACGCCCTGCTGCGTGCCAGCGACGGCGCGGTCGGCATGATGCCGAAGAACAAGGGGCT
TTGCCCGGATGAAGATCGTGGAGTGGCACGTAATCCACTGAGTGGAGGCTGCGGATCGTGCAGCTCTTCGCTGAGTGCCGGTAAAGACACTGGAGCTCTC
CCCGAGCTGAACGAGGTGGTGACACCTGGCGTCAAGACGCACGCGAAATCACGGAGCTCTTCAGGGCGGACGGTGTCCATGAAGAGGAGGCAGCGCCGCA
AAGCGCTGGCTGCGAGACGCAAGGCGTCTGCGATCTCACGAGTCGAGAAGGGCGTGTCGAGCGGCGAGGCTCCACGCGAGAGCGAGCAGCTCTATACACT
CGTGAATGGAGTGACGGGCGACGTCGACGGAGGTATCAACCTCGACGACTTGCCCTCACTGTCTGCTCTCCTGGAGCTGGACGAGATGTCCTTGTCCAAG
TTCGGCGAAGCCTTGAAGGCTGGAGACTAGGCCGAGGTAGTGGTCATACGACCCGAAGATGAATTGAACTCGTCCTCGCTTCTGGATGAAGCTGTCCTGG
AAGACACCAAGAAGACGCTGAATGCGCGGAGCGGATCGGCGATCCTGAAGGACCCGTCGGATCCCTTGTATCAAGTGGTAAATTATTACCAGGACGTGGT
CTCGAAGGAGCTGCCCTCGGGGCTACCTCCGGATCGAGGTGTTCGACACGAAATCGATCTCGTTCCGAGAACGAAGTACTGCGTGACGAGGCAGTGGCCC
TTGCCGAAAGAGCAGTGTGACGTCATTGACGCGTTCTTCCGTGCGAAGCACGAGGCGGGCATGGTGCGTGAGAGTAAGTCTCCATACTCTACGCCGACGT
TCTGTGTCAGAAAGACGAATGGCAAATGGCGTATCGTGCATGCTTTCAACAAGCTGAATGCCGCTACCATCTCGGTGCAGACGCCGATTCCTCGGAAGGA
TGTTCGTCAGAACAACATGACAGGATGTACGATGTACAGTGCGCTCGACTTGGTCGATGGATATTACCAATTGCTCATGAGGACGAGCGACATCCCTCTC
ACCGCGGTGAGTACTCCGAGCGGCATGCTCTGGGAGTGGTTGGTGATGCCCCAAGGGCTTTCGAACGCGCCGGCGACGTTTAATCGTCTTGTGACGCAGC
TCTTCAGGCCCCATCGGGCGTACGCGCAAACGTACTTCGATGACATTTTTGTCCACAGTCGTGCGGAGCACGGAAAGACTGATATGGAGAACCATGTCGA
GCACCTGCGTGCTGTGCTCGAATGCATGCGTCAATACAAGTTGTACGCCAACATTGACAAATGCATCTTCGGAGCGGAAGAGATACCCTTCTTAGGGTGC
TTCATCGGGAAGCGTGGCCTGAGGGCCGACCCGGTCAAAGTCAAGGCCATTGTTGACTGGCCGGTTCCCAAGAACCAAAAGGATCGTCGCAAGTGGCTTG
GCTTGGCCAATTACTTGCACAAGTACAGCGAGAACTACGCTGAGATGGCTCGGCCACTCTCCAATCTCCTGAAGAAGGGTGCGGAGTGGTGTTGGAACAC
CGAGCATCAAGATGCGTTCGCGGCCATTAAGGACAGTCTCCTTTATGCGCCTATTCTGGCTCTGCCAGACCCCGCTCGTCCGTTTAGTGTCGTCTGTGAC
GCCTCGGACTTTGCCATCGGCTGTGCACTGCTGCAAGCAGACGCCGAGGGGCGCGAGCGCGTGGTGGCGTTCGAATCTCGCCAGCTGAAGGATGCGGAGA
AGAACTATCCTGTCCACGACAAAGAGCTACTTGCGATGAAGTATGCGCTCGTCAAGTTCAAGGTGCACCTGCTGGGCTCTCAGCCGTTCGTGATTTACAC
GGATCATGCGTCGTTACGCACTGCGACTCAGTCGCCTCGCCTCTCGCAAAGGAAGGCCCGTTGGCCGTCCTTCTTCGCGGAGTACAACTTCGAGGTGAAG
TACAAGCCTGGCAGGCAGAATGTCCTTGCGGACGCGCTGTCGCGCAGGCCGGATTATGAGCTGGCTCATGTAACGACCGTGACTTCGTCATTAACGGATT
TGATCCGAACGGCTTATGCCAAGGACGACACCTGTGTCGCGTTGCTGAAGGCTCTGGGGAGCAAGGAATTTCAAGACTCGGACATGGAATTGTCAGCGCG
GCTGCGCGCGCGGCTACACCGCTATTCCCTCCATGGTGGCCTGTTGTTCTACAACACTGGCCCCGAGGATACGCCCCGCGTGGTCGTCCCTCATGATGAG
GATCTGAAGTACCGCATCCTCTATGAGGCACACGACACGCCGCTGGCCGGCCATCTTGGCCGTGAGAAGACCTACAGCTCGGTGAGGACCCACTACTGGT
GGCCGAAGCTGTACAAGTGGACGAGCACTTATGTGCGCACGTGCGAGACGTGCCAGCGAGTGGAGTCGTCACCTCATGCTGCAGCGCCGTTGGCGAATTT
GCCTGTCCCTTCGGGCTGTTGGCAATCCATGAGTATGGACTTTGTGTTTGGCCTGCCGGCGGACGCGGCGGGCAACACTGGTGTCGTGGTCTTCGTGGAC
CGACTGAGCAAGATGGCTCACATTGCGGCTGTGCCGGATACCATCGATGGTAAAGGTACAGCAACGCTGTTCTTGGACCGAGTGTTTCGACAACACGGAC
GCCCAGAGTCGATTTTCTCGGACCGACACCCCCGCTTCACGGGCAGCTTCTGGAGCGCGGTCTTTGCGGTGCTTGGCACCAAGCTGGACATGTCCACGGC
GGACCATCCGCAGACCGATGGTCAGACAGAGCGCGTGAATCGCGTCGTCGAGGACGTGCTCCGCAGCATTTGCGCCAAGACGCCGAAGCGCTGGAGCGCC
ATGCTGCCACTCGTTGAGTTCGCGTTGAACAACGCCGTGCACGCCTCGACAGGCTACACGCCGTTCTACGTGAACAGTTTGTCTCATCCCCGCGTCCCGC
TGA