Transcript Name :
Phyke_g11773
Location :
Scaffold_1323 : 543 - 2417
Orientation:
(-)
Number of Exons:
1
Description :
Crinkler (CRN) family protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-624
SECRETOME -- Non-signal Peptide Protein Secretion
NN-scoreoddsWeighted Score
0.5291.2850.003
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
TypeScore
cytoplasmic609
GO
*** None ***
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        1875 bases(100 bases per row)
ATGGCGCGGATGGCGTGGTTCCAACTGGTGGATTTGCGTGGCGAAGCATTCAACAACACGACTCCAGACCAAGTGCCATTGAACGATAATAACAATGTTG
CGAGCTTCCGAACAGCAGTGAAGAGACTATATGAAGACAGCCACCTCCACGGGATTGCTGCGTCCGATCTCATCGTGTATGAGAGCCAGGCGGCGTTTGC
TGCGGAACAACCGCTTGAGCTCGATGCAATGATTGAAAAGCGTGGCGGAAAACTACGGAATTCGCTCCTTGTAAAAGTGCCGAACCTCACGAGAAAGCGA
AAACTCTCCGAAGAGTCGATTCTGGATCAGTTGGAAGCACTGCAAGTTGCCGAAGTCGAGTTTCAACTGGATGCGCTCTCGGATAAGCAAGAAAGTGAGA
ATCCGATCGTGATGACACCAGGATTGCACACCTTTTGGAAAGAATCTGGTGATTTTCCGTCGTCTTACTTCGTTCGgaaggaagaagtggtgTTCTGGCA
AGTGGTGAAGGGACTGCTTCCTACTGTTGGAAAGAAGCGCATTGTGATGGTCGGCTCGCCTGGTGTTGGCAAGTCGTGCTTTCTCATGCTTGTTGGCTTC
TACATGGCATGtgtcgagaagaagaaggtgctcaTCATACGGCGCGTGAAAGAAGGTGACGTTGCAAATGCAGTGGTGTATTTTGATGGACAAGGGTCGT
TTGCTCGACAAAAAAACCTCTCTGCTTATCGCTTGCAACTCCTTCGCGAGGAAAAGAAGCTTCAGGGTGCGCTCGTTCTTGTTGATGGTTATTCGCAAGC
TTATGTCGATTCGGAAGCAAATGGACTTCTTCCATTTCATCTTCTGGCTACATCGTGTCAGTACGACGCGAAGCACGATGACCCGTCACATGTTGTGGTT
TTACCGGCGTGGCAGCGCGACGACCTAGAGCAGTACGCACGTTTGACCGAATGGGTGATCTCAACTGGATTTCGCAAGACCAAAAATTTGAAGGATTCGA
CTTGGCCCAAGCTTGTCAAAGAGCAGTACTTTTACTCTGGTGGCAGTCTGCGCGAGTTTTGCAAGACACGCGAAGCTCTCGAGGAACAAGTTGAAAAAGA
TTGTGGTAAAGTTGGCAATGCGCAGGCATACCAACTGGTTTACACGTATGGAGGTGATCGGAGCAATGATCAAGTGGATCGAGTTCGGCGCCATTACATC
ACCGATCCAAAGAACGAAGAGCACTACACAAAGTCAAGATACTGGAAGGTCTCGGTCGATTCTGGATATGCATTGAAGTTGTTGGGACGACATGTCAGca
tggagaagcagttggaAGTGTTCAAGTATGCAGAATCTATTGGTGCTGGCTTCTTAGGTACCGCATATGAGCTGTTATTGCACCATGCCGTCCATGAAGC
GTACGCAAAGAAGACTCCTGTTgtgttgaagatgaagaagggaTCGTACTACGAAAGAATCGAGATATGTGTTCCACATGTTGAATGCTGCGGCGAGAAT
GAAGATGAGTGCTACATTTGCTTGGCCAAGCTCTCTGAGAGGACTTATTGGCATCCCGATTATCCATTCTTCCCTTTCATCGATGCAGTGGTGATGTGTG
AAGCGTTTAAGAGTGGAAGCAATCGCCCAGAGATGATCGTGGCTTATATCCAGGCGACCATTCGAAACGAGAAAACCTTCAAGCCACATCGACTACGCGA
GTTGAACGAAGCGATGAATAAGAATCCGAACATCGTTGATGTCAATCGTgcgtttgtggtggtgggcCCAGACTCCACTATCTGCGAGACATTTACATTG
CGTGATGCTCCAAACCCAGAGGATTTTCTGACGATGGTGAGCTGCTTCGACCCACACGAGTTCGAGAGACAATGA