Transcript Name :
Phyci_88705
Orientation:
(+)
Number of Exons:
1
Description :
hypothetical protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Gene Model plot
Functional Annotation
*** None ***
*** None ***
*** None ***
Profile scan predictionP-Valprediction_id
RNA helicase, DEAD-box type, Q motif9.434PS51195
Helicase, superfamily 1/2, ATP-binding domain29.308PS51192
Helicase, C-terminal18.322PS51194
HmmSmart predictionP-Valprediction_id
Helicase, superfamily 1/2, ATP-binding domain1.2SM00487
Helicase, C-terminal2.1SM00490
*** None ***
*** None ***
*** None ***
Interpro Domain nameprediction_id
Helicase, superfamily 1/2, ATP-binding domainIPR014001
RNA helicase, DEAD-box type, Q motifIPR014014
*** None ***
InsideOutsideTMhelix
1-788
NN-scoreoddsWeighted Score
0.7836.7840.014
*** None ***
TypeScore
nuclear522
GO
Biological ProcessGO IDPrediction Method
ATP bindingGO:0005524IEA
nucleic acid bindingGO:0003676IEA
helicase activityGO:0004386IEA
*** None ***
*** None ***
Sequence
        2520 bases(100 bases per row)
CCAGCCATTCCGAAGAGCTCCGGAGCCGAAGGGCAACGACACTTGTCCATCCAGTCGCCATGGCCTCGCGCGCCTTCCGCCAGGCCCACAGCCGGCCGAG
CGCCGCCCCCGTACAGGACGAGGAGGCTGCAGCCGCGTCTGCCGCCGCCAAGATCAAGCAGAACGAGCGCGAGCGCCTCGAGATCGAGCGGCTGGAGGCG
CGCATCGCCGAGCAGACGCCGGCGCGCGGCTCGCAGCTCGGCGAGGCCGCCAGCTTCGACCTGTTCCCGCTGTCCGAGGCGTCACGCCGTGGGTTACGCA
CCTGCGGCTTCACGGCGCCCACCAAGATCCAGGTGGGCGCGCTGCCCCACGCGCTGGCGGGGCGCGACGTGCTGGCGGCGGCCAAGACGGGCTCCGGCAA
GACGCTGGCCTTCCTGCTGCCGGTGCTGGAGAAGCTATTCCGCCTGCGCTGGAGCGTGGAGGACGGACTCGGTGCACTCGTGATCTCGCCCACGCGCGAG
CTGGCGCTGCAGATCTTCGAGGTGCTGCGCAACGTCGGCAAGGCGCACGCGTTCTCGGCCGGCCTGGTCATCGGCGGCAAGAACTTCCGCGAGGAGCAGA
TCCGCCTCGTGCGCATGAACCTGCTCATCTGCACGCCCGGAAGATTGCTGCAGCACATGGAGCAGACGCCGGCGTTCGACGCCAGCAACCTGCAGGTGCT
GGTGCTGGACGAAGCCGACAGGATTCTGGACCTGGGCTTCCAGAAGCAGCTCACGAGCATCCTGGAGCACCTGCCGCCCGCCGGGGAGCGCCAGACCATG
CTGTTCTCGGCCACGCAGACCAAGTCCGTGAAGGATCTGGCGGCGCTCAGTCTGCGCGAGCCCGAGTACGTGGCTGTGCACGAGCACTCGGCCAATGCCA
CGCCCAAGGGACTTTCGCAGAGCTACGTGGTCACGCCGCTGGAGAGGAAGCTGGACGTGCTGCTGTCGTTCATCAAGTCGCACCTGAAGCAGAAGACGAT
TGTGTTCTTGTCCACGTGCCGGCAGGTGCGCTTCGTGCACAGCGTCTTCTGTAAGCTGCAGCCTGGTATCCCGCTTTGCGCGCTGCACGGCAAGTACAAG
CAGGGCAAGCGCGTGGAGGTGTACTACGAGTTCCTGAACAAACCGGCAGCGGTTCTGTTTGCTACGGATATTGCGGCGCGTGGTCTGGATTTCCCGCAGG
TCGACTGGGTGCTGCAGCTCGACTGCCCCGAAGACTCCGCTAACTACATTCACCGCGTCGGTCGTACGGCTCGTTACAACAAGCAGGGTAAGGCCCTTAT
GTGCCTTGTGCCGTCGGAGGTGGATGGTATGATGAAGCGCCTCGACGATGCCAAGGTGCCGATCCGTGAGACGAAGCTGAACCCCGCCAAGACTACGAGC
TGCCGCCAGAAGGTGGCGTCTGTCGTGGCCAGTGACAAGGAGATCAAGTCTCTTGCACAGAAGGCTTTCATGTCGTACGTGCGATCTGTGTACCTCCAGC
CGGATCGCGAGGTGTTCGATGCTACCGCTCTTCCCCTGGACGCGTTTGCTGAATCATTAGGACTTCCTGGTGCTCCCCGCATGCCGTTCTTGTCCAAGAT
GAAGACTGAACACGAGAAGGGTGGTAACGAGGCACTGCGGGAGGAGCTTCGTGGTAAGAAGAACGTCAACCGCAAACTCCAGCAGCTCAAGGAAAAAATC
AAGGCCGAGAAGGAGCGCAAGCGTTTGGCACGACAGCTCGCTGCGTTGAATCCCAAGGAGCAGGAGGAAGCgaagaagaagctggagcagaagcagaagc
agaagcaagaagaggagtctgaagaagaggaagaagaggaagaCTCGCTCATGGTTGTCAAGCGTGTACACAACTGGGACGAAGACGAGGAGCTGGACCT
GGATGCCCTCGGCCCCAGCAAGAAGAAGCAGAAGAAGCTGCGCGTGGACCGGGAGGCCATCAACGCTTCCAAGATCGTGTTCGACGAGGAAGGCAAGGGC
GCCAAGATGACAGACCGCCTCGCGGCTCGCAACATCGACAACAGCGGCGACGGCGAGTTCGCCGACGTGGAGAAGCACGCCAAGAGCTACACGGAGCAGG
TGGCAGCTCGTCTCGCCGCCAAGGACGACGAAGACCGTCGTCTTGAGAAGGAGCGTGTGCGTGCCAAGCACCACAAGAAGCGCATGAAAGTCAAGGGCGA
GCGCGACGACGACAGCGAGGACGAGGGCGCGCGCCTTGTGGTGGGCTCTgacgacgacgaagacatgagcggcagtggcagcgagggcagcgatgacgac
gaggaggagaccagcagtgacgaagacgaagaggacgacgacgTGAGCGACAAGAAGAGGAAGGTCGACCGCAGCGCCGTGGCCAGCCAAGAAGAGATGG
CCTTGCGCATGCTGCAACGCCGGTAGATCCACCCTACCTACCTAGATACCCTACCTACCCTGCTTGACCATAGATGCACAACCGTCCACAATAGAGCCCG
TCCACGAAGGTGGGACCTTC