Transcript Name :
Aphas_H257_00053
Orientation:
(-)
Number of Exons:
11
Description :
Hypothetical protein
This protein is a Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Gene Model plot
Functional Annotation
*** None ***
*** None ***
*** None ***
Profile scan predictionP-Valprediction_id
Tetratricopeptide repeat-containing domain20.949PS50293
Tetratricopeptide repeat6.756PS50005
Tetratricopeptide repeat8.142PS50005
Tetratricopeptide repeat7.021PS50005
Tetratricopeptide repeat6.048PS50005
Tetratricopeptide repeat5.251PS50005
HmmSmart predictionP-Valprediction_id
Tetratricopeptide repeat36SM00028
Tetratricopeptide repeat3.1SM00028
Tetratricopeptide repeat97SM00028
Tetratricopeptide repeat210SM00028
Tetratricopeptide repeat300SM00028
*** None ***
*** None ***
*** None ***
*** None ***
Y-scoreD-scoreY-pos
0.7530.77525
InsideOutsideTMhelix
1-881
NN-scoreoddsWeighted Score
0.6421.7810.004
*** None ***
TypeScore
cytoplasmic478
GO
Biological ProcessGO IDPrediction Method
protein bindingGO:0005515IEA
*** None ***
*** None ***
Sequence
        5744 bases(100 bases per row)
GCGCACTTGCGGTTGCATGTTGTTGGTGTCCACGTGGTTCTGGTGGTCCTGCTGGTGGTGGGCGGGCCTGCATCGGCAGGCCGACGCCGTCTCTATCGGG
GGTTCGGTAGAGTCCACGCTCGCGTCCTTCCACCATCCCTTCCTTGAGATTCTCACCCCCGTGAATGGCCAAGTGGCGGAAACGACCGAGGTGGACATCG
AGCTCGTCGTTCGAGAAATCACCATGCCGAGTTCCTTCCGTGGTACGAAGATTTGTCTGGGAATCCACGCCAAAAACGCAGTGCCAACGAGCAACGGTGA
TACGGAGACTGGTCTCACCGAGTTCTGCTTTGACCAGACCAGCAGCAAGGTGTTCCACGCGCAAAACCTCGTCGCAGGCATGTCGTACACGGTCCGCGTC
TTCCTCGTGGACCGAGGCAACGTCATCGCCGTGTCCATGCGCCACTTCCGCGTCGCCGCCATCGCGATCCCAGGCCACGCCGGCCTGGTCACGATCCTCA
CGGCGCTGCAGCACGCGGTCACGTTGCACGACACCGACGCGGCAGTCGGCATCTACAGACGGATCCTGGTCGAAAGCCCCGAGCACAGCCACACCCTTCA
TCTTCTCGGATTGACCAAGTTGCGGGCAGGTCGGGCCATGGAAGCCATTCCATACCTCCAGCAGGCGCTGCGAGCCAACGCGACCATTGAGGCCCTGCAC
AACACGCTCGGGCTTTGCCTCAAGGAGGTGGGGCGATCAGCGGACGCCGCCTGGCACTTTGAGAAGGCGCTGGCCCTTCGTCCGTCCTATGTCGAGGCGC
GGTTCAATCTGGGGACGCTGTGGCAAGCCACACAAGTCTACGACCGAGCGATCGATGAGTTTCGGACATTGGCGGCGATGGTCCAAGCCAACTCGCTGGA
CCTGACAGTTGCCCATCAGCGAGATGTATTTGTGCGCCTGTGCGGCGCATACCAAGGCGCGTCCCGACGTGACGACGCGCTCGGGTGTTTGAACGACGCG
CTGGCGTTGTGGCCGCACGATACGGATTTTATTAACGAACGAGGCAACTGGTACTTGAATGTACGTTTGTCATGTATGGTGAATCAAAGCAGCACCACAC
ACTCACACACACACACCGTGGACACTGGTCCTGTGATTTACGACGGGTTTATATATATATATGTATGTATACACATATATATATATAGTATTTATATAAT
ATGATTTATATATATATATATATCATAGATATATATCATAGATAGATGTTATATATATTATATATAGATAGATACGTTGTATATATATATATATATATAT
ATATAGATAGATAGATTTATGTATAATATTTATAGAATGATGTATACATATGTATATTATAAATAGATAGAAATTATATATAGATATATATGTTGTATAT
AATATAGTGCCATGAAATATTTGATATATGCAGCGAATGGTTGTGTGCTAAGGTTGTTGGTGTAGGCTGGGTATTTGGACTTGGCGCACGACGACTATCA
AGTCGCGGCCGACGCGGGTGCTCTTGTGGCGACGGTAAGCGCTAATACATGGATATACCTCATGTCCTTCTGTCGAATGGATTTTATGGCTGGACCATTG
GAATAGAGACTATTTATATCATAAGTTTGTGTGGTTTATAAATGTATGGGATGCTACTGGTGGTGTATCAATATAGCTACTATGTAAACACACGAATATT
GTGCTTTCGAGTGAAATTTCGTGTGGTGGCGTGGTTTCTCGTTGGAATTTAAATCGATTTGATTGGCTACTTCAGAAGACCTCAAAATTATTAACCAATC
AAAACCTTCTCAGTGAAATTCAACCAATCAGATCGATTGTGGATCGGTTTGATTGGCGCGATTCGATTGCACCCCGTCCCCAATTTCGAATCGACTTGAC
GATATGTTGTCAAATGTAGTTCAATCTGGCCCTGGTGAAGGAAGCCATGGGCCACACTAACGACAGTATCAACGTATACGCCAACGTACGTGTCCATGCT
TCTCACTTGGTCGCAGATCAACCAGGTTTCCAGCGACTAAATGTACTGGTTGGTACTGCCTAGTTGCTGCAATTAACTGAGACTCGGCACCTTTCGACAA
GTCACATCCGCATGGTGCAGGCGGGGGTGGTGCCGCGGGTCCTTCCATTTGACAGCGCTCTCGTCGACCAAGCGCGGCAGGACATGGGCCGCCGCTTGGA
TGCCATGCTGCAGCAAGGTACGTCAGACTATCATCCCGCATGTATTGTGAAAATGTTGATATAACTTTTTCATAATAGTTGTCATACCATTTCATGGCAT
GGTGAATAATAGTATAAATGAATGTTCGTGTGCATTTAGTTAATCATATAATTTTTTGCATGTATACACATTGCGAATCAAAGATATAGCTGCATTTCAT
GGCGTTCGTAGACAGCATCACCACCGTCGACTGGACAGACCTGATGACAAACCAATTCCCCACGGGCTACCACTTGATATCCCACCCCCACAACAACAAC
CAGCTCAAGCAAAAGCTCGCGACGATGCTCGAGATGTACGCTCCGTCCCTCAAAACCCCATCGTTCTTGGTACACAGTTCACTTGAAGTTATATACTCAA
CTATACAGCACCTCATAATGGTGAAATATCAATACCTCGTAAATGGAAACTATATTTTATAAAAATACGAAATCCACTGAAGGACCTGGCAGTTTTCTTT
CAAATTCTCACTTATTGGAAAGTGTACCACCAGCTAAACTTAATATGTACTGCATTGTCGTAGTATTATTGTATATATATATATAATTATTCGTACGTAT
TTATTGAACGAATAGCATTCATATTAAATCAAAGTATAGTACAAGTCCTTGGGTTTTCTAGGTGATCGTGACTCTGTTGTTTGAAATGTCGGGTAACGGT
AGTTTTGACCGTTTCTATTCCATAGGGCCGTTCGTACTCGACGATCCCCCGAGAACTGCGACATCGTTCCCGCATTGGATTTGTCGCAGAGGACTCGCAT
GTCCTAGACTTGGTGCACGCCCTTGACCAATCTTCGTTTGACGTATTTTTGTTTACCGTGTCATCGTCCGCGGCGGCAAACGTGGCCCGCCAACTCGGAC
TTCGCCATGTACATGTACGACACCTGCGATGGAGTCTATTTCGATGCTTTGAGAAATCAAAAATACATCTGATTTAACACCATATTTCCATGTGATAGTT
TGTGGCGCTGCCTGCTGGCGTCGGCCCAAGCGCCGTGGAAATCCAACGACACGACCTCGATGTGCTAATTTACGCCGATGTACGACCCTCTTATGACCGC
TAACTTGATCATTATAAACTGTTCCACGTATTATATCGATTATGGTATTATTTTTTATAATAGGTGGGAGCCAACAAGTGGAGTTACTTTTTGTCGTTTG
CAAAATTGGCGCCCGTGCAAGCAGCGTGGGCACTTGGATACTCGGACACGTCGGGCGTACGCGCCATCGACTATGTCGTCACATCCGAATACGAGTATCC
GGACTTCGACCGCCAACACTACTCGGAGACGCCGTTTGCACTCAAGTAAATATTAAACTACTAGCTAGTTCGTACTGGATGTGTGATGCCGTTTTTTCAT
GCGACAGCGATGGGTTCGTGTAGGGGCTTGGGCCTGTATCAGACGCAATCGATGGCCCCCAACACCACGACATACCCGCTGACTAGTCGCGCGCACATTC
GGCAGTTGCTCGTGCAAGAATTTCACCTCCCCAAGTCATTTCACTTTTATTTCGTCGCCGAGGTATTTGATTTAGGTTGCGAAATCACATATATATAGAC
GACGACACTCTCGATCGTAATATATGTGAGCATGCAGTGGTGTGGACTTGGCTATTCAAGATGTTTATTTCAAAAAAGTGTATATAGACTTAGGTTTTAT
GATTATTATTTATAGAATTAGGTTTTATGATTATTATTATTATTGTATTTGCATATGTTGACGTGGATTTTATTATAATTTTTAATATTTTATGGTATTT
GCATGTATTTGCGAGACTACATCATGCATTGGCGAAAGCTTAGCCGCGTTTGACTCGCGTGTACATGATGTTGTGACAATGGTAATTATAATTGGGAACA
ACGGTCATATTGTTTTATGTTGGAGGCCCTTGGATATATATATATATATATTGGAGATTGCCATTGGATTTATATATATATATATATATATATATATATA
TGTATATATTGGAGGTTGCCATTGGATAGGTATAATATATATATATATATATATTGGAGCAGAATTGAATCAACTTTGTGTTTGCACTACACTGTACTAC
TACTGAACTGTATGTAGCCAGTGGACCATCTCCACGTGGACATGGACGCAGTCGTCCGGCGCATTTTGAAGCGCGATCCCCTGGGCCACATGTTCTTTCT
GGCGTCGCTTTCGCATTGGAACGCGGCTTTCGCAGATCGGATGACCCTCCAGCCAGGCCTTCCCATCGACCGAGTCCACTTGATCGATAGCTCGGAAGTG
CCTGTGGCGGCTCTGCTTAGGGCGTGCGACGTCCACCTCGCGAATCTCTACACCAACACTTTCCAGCATACGCTAGAGGTACATTTATCACCGATCGACC
TAACTAGTATTGCTTCGAGTACACAAACATCGTGCACGGTGGTTTCGTTCTGAGATATGGTGCCTTGGATAGTAGTAGTAGTAGTATAAATAGTAGTAGT
AGTAGTATATATATATCATCTACATGTACTAGTTAGTCGCCACCAGGTTGTATAGTTGTAAGTCGATTCGAATTTCAAGTGTTTGGGTGCTCAATTGCAC
TTCAAATTAGTGTTTGACTTTAATCAGTGTGAGACTGAACCATTGTTACATACAAACGTCAGTACAAAGAATCGATCGATAGATTTGGCGAATCAGCACA
AGAGTCCAAATAATTATGGGTAAAAGGACAATATAAAGTGACATCCGGATGTCATGATGCCATGCATTTCAGGATATGTAACAGTAGTCAGCCAGAGTTT
GGACTTTTATGTTAATTTGGCAAACCCGTCGACCGATTTTTTGTACTGAATTTTGCATGTCAAAATATGTCAAGCGGTGAGATCTCCATCACACTAATTG
AAGTCACGCACTACATAGTTGTTTATTGGTCCGATGATTTACTGCAATATGATTGGCTAAGTTGTTCTGCCGAGACTTGTGCACACTGTAGGACTTGACA
ATATAGAATGCGGCCAACGCTTATAAGAGCATCATGCAGTCGGCCAGGATCTGACGTGGCAGCGTGTGTATAGGCAGTGGCGGCGGGGGTGCCGACGGTG
ACCCTGCCGGGACAGCTGTGGCGCACTCGAGTTCCGTTCGGAGTCCTCCGACACATCAACGCCGTCGCGACTGTCGCCACGTCCGCGGCCGACTACGTCC
GGCTGGCCGTCCGGGCGGCGGGGGATCAGCCGTTTCGGGACGCGGTGGTCGCCACATTGCACTCGAACGGACCCAAATTGTTTGGGGACGACACCGCCGT
GATCGAGTGGACGCGGTTCCTCCACTTTGCACTCGACCAAGCGCGCCGCGTTCGACAAGAGACGCCCGTGATGTGACACTGTTCAGTGTATATCTGTGTC
ACATATGCTCATGTTACGATATGTTACCACACTATTTAAGCGTGATCGATCGAGTTGAGCTTTTCAAACGCGAGCATGAGCGCTTGGGTGCCGAGTTTCG
GGCCATTGGGCAGCGCCTACACAAATATATATATATATATATAT