Transcript Name :
Sapdi_VS20SDRG_05898
Location :
Scaffold_16 : 129224 - 131932
Orientation:
(-)
Number of Exons:
9
Description :
hypothetical protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-781
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
*** None ***
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        2709 bases(100 bases per row)
ATGGAGGGTGCTAGCAACGAACTCGCGGTGCTTCAGAGCATTACGCCGCGCCTCCAGCCCCCGCAGTCGCCGAGCACCGACGGAAACGACGTCGATGACC
TGCACGACGTCGTCTCGATCCTCAACGCACTCTTCGCCGACAACGTCTCGGCGCTCTTTGTCGTACGTCAACTGCCAGACGCTGATCCACGCACTCATTG
CCTTGCTGTAGAAGAAGGCGTTTGCCGTGCTCCTCAAGCTCGTTCGGACCCGTGACGGCGCGCACGAGATGCACCGCCACTTGGGCGAACTCACGATTCT
TTCGATGCTGCGCGTCAAGGCGTCCGTGCCCGTCATCCAGTCGTACGGTTTTGTGCTCATTCGCAAGCTGGCTTGCGCGTGCGACGAGAGCCATCGGGTG
CTGATCGAGAACGGTGCGATCGAGCTGCTCGCCAACGGGCTGCGACGCTTCCCGGACGACGTGATTCTTCAGGTACTTGGCGTTCTCATTCCATCGTACG
ACGCTCAGAGACGCTAGTCGGCGGCGGCGGGGGCCCTCGCGCCGCTCGTGCAGCACGACGACAGCAGCATTGACATCGTCCTCGGGCTCGGGCTTCTTCC
CGTTCTCGTGCGCCCGATCGTCCAGCGCAATGACAAGACGGCCGACCAAGCCGTCATCTACACCTGCGCGAGTCTGCCGCTTTGCTGTCATCGACAGCGT
CTTGATGGGCATCTTTTAGTCCTCGTCGCTATTTGCCAAGCCCGAGGCAAAGACGTCATTGGCACGATCCTCAGCGGCCAAGCGACCGGTGCAGACGAGA
ACTGGCCTGTTCTGCAGAGCCTTGTGCAGCTCTTGCAGGCGAGCGTCAACGTGGAAGCGTCCAAGCGGGTCTCGGTTGCGGTTACGACGGCCCTGCTCTG
GTATGTCGACAGCATATTTGGTTGTCTGACGCCTCGAGCTAGCTTCATGTCGATGGACCGCACAGTCACCGACGTCCTCGACGAGCTCCGCGCGCTCTCG
ACTGTGTCGCACGCCATGGTGCAGTTTGCGGCCGATGCAAGTATGAGCGGAGATACCTGTTGAAATCGCTAAAGATGCGACAAGGTGTGCTCAAGTACTC
GGGCATTGTGTGCCAGCAGCTCGCGCGGTCCCCGGTCAAGCGCGTCCGCACCTACTCGCCACAAAGTAGGATTTCCAACAGCCTATTGCACTGGCTCACA
GCCAACTCGTGTAGAAGTCACTCGAACGACCAAGCTCCGCGTCATGACCAGTCCCAAGAAGGAGCCCAAGGACGGCGTCGTGTACGATCCGATGCCGAGC
ATTGGCGAAAAGGACAAGGAGCGCGCGCTGGCGCAAGCAGAAGTCGCCGACCGCGCCGTGCGCGGAAACCTCCTCACGTCTGCGTACGGGTTTGCCAAGC
CTCTCAAAACGTCTGTGGCTGTTGCGCCGTCGCCGTCAAAGGAGGCAGCGGTCAAGCCCCGGCCGCCCGCGCGGCTGCCACCCCAGTCGTCGTCACCGAC
GAAATCACCGACCAAAAGCCGCGTGCGACCAATGCCGAGCAGTCGTACGTTGCTATCTAATGTGTTGGCATCGAAGACGACCATGTGTCTAGTCATCAAA
TCGCCAAGCAAGCCGGCGCAAGGAATCGGGACGGAAAAACTCAGGACGCAAGCGTCAGCGGCGAGCCTCGATGTGCCGCGACTGCCCCTCGAGCCGCGCC
TCCTCCAAACAGCACCGACGTCACCGCGACCAGCCCATTCCCCAACAACGCGCTCGCCGCGGAAGGAAGCGTGGCGATCACCGGTGCCGTCGCCCCGGCA
GACGCCGACTCCTCGCAAGGCCACGCCACGCAAGGAGCCCAAGCTTGCCACCCGTTCTGTCAACGATACAGCAGCCAACTCTGCTGTGAGCGCCGCGGAG
GAGCCCGTCTTGGTCACGCGCGACGACGTAGCGCGGGAGGTGCTGATAGCGACGGCGATTGTGAGCTCAGCGCTGGACGACGCGATGGTGACGGCGGCCA
ACGAGGCCTTGCGGCGGTCGTTTGCCCCGCCACCGAGTACTCTTTTACCCCCGGATATCGTTGCATCGATCGCCAAAGACGGTATCTTTGCAAAGCTGTT
TCACGAGGTACCGAGGTCGCCCGTGCGTCACGAATCGAAAGACACGGACGACGTTCCACTGGCTACGATGACGGTACTCGCAGCCGAGGCCAAGGACGGC
GACGCAGCGACGAGCATGGCGACGGACGAGAGCGTGGCCATGGCGCTATTGGCCAAGCAGTTGACACTGGCGTGGGTGTCCCACGCCGCTGCAAGCGTGG
CCGACGATACGAGCAGCGCGCTCTCGGCGTCGATCGTCTGCGGTGTCTGCGACGACATGATTACGGCGTTAGAAAATGGCGTTGACGCAAGCGCAAGCGA
GGACGCTACCTCGGAGGATTATGCATCCACCGCGTCAAAGAACACGGTTGATCTGACGAGTGAAGCGACACGGCGCCCGTCTGCCCCGAAGATCGATGCT
CTGGACGATTTAGACCTGGAAGCTGCCTTTGATGATGCGATGGCGTCGGCAACCACTGGCGACGCAGACGCCCGACCGAGCGATCTCGAGGACGCAAGCA
TCTTCGACGATGCGCCAAGCGAAGTTGGTCATTTGAGCGCGTCATCACAAGGTGTCTCCAGTCCCCGCCCCGTTCAAAGTGCCGAGGCGAGTATCACGAC
GAGCCATGA