Transcript Name :
Pytul_var.sporangiiferumsnap_masked-pug3_contig_162-abinit-gene-0.29
Location :
Scaffold_162 : 19984 - 22228
Orientation:
(-)
Number of Exons:
9
Description :
Endomembrane protein 70
This protein is a Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
Y-scoreD-scoreY-pos
0.7890.85320
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-296
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
PositionContextScore
226VHSRWRR|AT0.666
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
*** None ***
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        2245 bases(100 bases per row)
ATGCGCGCGTGGACTACGGCTGTGAGTGGCGCGCTGCTGGCGACGTCGGCGGCCGCGTTCTCGCTGCCCGGCGTGCAGATGACGACGTATGCGAAGAGCG
ACCACCTGCCGCTCTTCGTCAACAGCCTCACGTCGTCCGAGACTCTGCTGCCGCTCGATTACTACAAGCTGCCGTTCTGCCAGGTAAAGGGAGGATCTCT
GTGTGTGTTGCTAGCATGAAGAGGCTGTTGAGCGTCTAGGGGAAGTGGGCATTGATATGGGGAAGAATGCAGCGCCTCGGAAGATACTAATGTGTCCTTT
TTTTCTTTGGACGTCCGTTGTGTTCCTTGGTTGGATTTTTTTGCGTGTGCTGCAGCCAGAGAAGATCGAGTACAAGTCGGAAAACCTCGGCGAGTATTTG
ACGGCCAACCGCATTCAAAACTCTCCATATGAGGTGCGTCGTTGTGCCCCTAGATACATTTTCAAAAAAGGTTGCGATATTGGGATGATGCTCATTATGG
TTTTGACTATGGTCTAAATATCTTTATAGATCAAGTTCCTAGAGGATCAGGAGTGTACGGTGCTCTGCCAGCAGACGTACAAGGATGAAGACGTGAAGAA
ATTTGAAACGAAGGTGAAGAACTCGTACCGCGTGAACTGGTACGAAGCTTCTTTCAATGCAATGCAGCTACAGCTTGAAGGACATTTGACTAATGATGGT
GCTTGCTTTGTTATGGCAATAGGATCCTGGACAACCTTCCCGTGACGTCGGTGTCGACGGAGGGCGTCCTCGGCGTGGGGTTTCCGCTGGGCAGCTTCAA
CCCGGAAGTTGAAGTTGTGCCACAGCTCAACAATCACGTCAAGATCCGCATTGGGTACAACAACGCCATCGGCACGGCATCGCGCGAGGAAGGACGCATC
GTGGACTTCACGGTCACCCCTTACAGCTTTGCGTACAAGGAAGCGAGCTTTGTCAAAGAGAAGAACCGCATGACGTCGTGCGACCANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTCCACTGTACCTGAACAGCAAGGCTGGCGAACTCCCTGTGTACTGGACGTACAGCGT
CGAGTGGATCGAAGACAACGAGAAGGAGTGGCGCACGCGCTGGGACATCTATTTTGAGGCCGGGTCGGGCAGCGACCAGGTGCACTGGTTCTCGATCATC
AATGCGCTTTTGATCGTGCTGTTCCTGAGTGTGCTGGTCGGGATGATTCTCATGCGCAGTCTCCACCGTGACATTAGTCGCTACAACCGCGTGCCGACCG
ATGAAGAGCGTGCGGAAGAACGCGAAGAGTCCGGCTGGAAGCTCGTGCACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGTCCGC
CAACGAAGAACCCGATGCTGTTTTGCGTCATGGTCGGCACGGGCACCCAGTTGCTCGGCATGGCGCTCGTGACGCTGTTCTTTGCGGCCGTGGGTGTTCT
CGCCCCATCCAACCGCGGCAAGTTGGTAATCGCGCTGCTCGTCGTGTTTGTTTTGCTGGGCATGCTCGCGGGTTACACGTCGGCGCGCACCTACAAGATG
TTCAAGGGCAAGCGCTGGCAATTGTGCACGATCTTGACAGCGACACTGTTCCCTGGCATCCTGTTTGCGCTCTTCTTCTTCCTGAATCTGTTCGTGTGGG
GCGCCGGATCGGACGCCGCAGTGCCGTTTGGCTCGATCCTGCTCGTGTTTTTTCTCTGGACGGGCATTTCCGTGCCTTTGGTCTTTGCCGGCGCGTTCTT
CGGCTTCAGGTACGAACCACAAAATTACGACAAGCATCTTATTTCGATAGTCGGTCTTACTTACGATTGTGTTTGTTCTGTCATTCTGTAGAAAACCCGC
GAGTACATTCCCGGTGGCGACGAGCAACATTCCGCGTCCGATTCCTCCGCAGGCGTGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTGC
AGTCGGAGGCGTGCTGCCCTTCGGCGCCATCTTCGTGGAGCTCTTCTTCGTGCTCTCGTCACTCTGGACCGACAAGTACTACTACGTGTTTGGTTTCCTG
CTGCTCTCGTTTGTGATTCTCGTGCACACGTGCGCCGAGATCACGATCGTGCTCACATACTTCCAGCTCTGCGCCGAAGACTACAACTGGTACGTACCTC
CTTGTCTTTGTTAGAAGTATGCGCTTTAATGAGCAGTGCGGCTGA