Transcript Name :
Pytir_DAOMBR486snap-pir_contig_92-abinit-gene-0.107
Location :
Orientation:
(-)
Number of Exons:
1
Description :
Pentatricopeptide repeat-containing protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed

Functional Annotation
Profile scan prediction | P-Val | prediction_id |
---|---|---|
Pentatricopeptide repeat | 5.393 | PS51375 |
Pentatricopeptide repeat | 9.843 | PS51375 |
Pentatricopeptide repeat | 9.547 | PS51375 |
Pentatricopeptide repeat | 6.654 | PS51375 |
Pentatricopeptide repeat | 6.149 | PS51375 |
Pentatricopeptide repeat | 5.009 | PS51375 |
Pentatricopeptide repeat | 7.278 | PS51375 |
Pentatricopeptide repeat | 9.065 | PS51375 |
Pentatricopeptide repeat | 9.712 | PS51375 |
Pentatricopeptide repeat | 10.731 | PS51375 |
Pentatricopeptide repeat | 6.993 | PS51375 |
Pentatricopeptide repeat | 6.555 | PS51375 |
Pentatricopeptide repeat | 7.936 | PS51375 |
Pentatricopeptide repeat | 6.095 | PS51375 |
Pentatricopeptide repeat | 5.24 | PS51375 |
Pentatricopeptide repeat | 6.84 | PS51375 |
Pentatricopeptide repeat | 5.382 | PS51375 |
Pentatricopeptide repeat | 5.623 | PS51375 |
Interpro Domain name | prediction_id |
---|---|
Pentatricopeptide repeat | IPR002885 |
Inside | Outside | TMhelix | |
---|---|---|---|
1-1223 |
*** None *** |
*** None *** |
Sequence
3672 bases(100 bases per row) |
ATGCGGCTTCCATCGGCGCCGTTCCTCCAGGCGCAGCGTTGCCTGCGTCTTGGAGCATTGCGAAACAGCAGTGGTAGCATCAGCAGCAGAGCTCTCGTGC TCCACAGCGCATCACGTTGCAGGTCTTCAGTCGGATGCACAGGCCCACCACAGTGCGCGGCATTCGCGACTTCCTCGTCACCATCCGCTCCAGCGTCATT GTCGCAAGTGCTGCTGCAAGACGCAGTCCATCGAGCTCATGACAAGACTGGTAATAATAAGCATACTGATTTTGCTGGCACAGCTGCTGCTATCGCCACG TCGCGTGAAGAATTGCTGGCAGTGATCGGATTGGAACACAACCAGAGCAATACCTACTACAACCAGCACCTGCGAGTGGCTCTCGATCGCAAGGACGTCC GCACTGCAGCGCTGATCGTTTCCGCATTGCGCGCGCCGAGTAGCAGCGACAGTGCTCTATCGAATGCAACGATTGACCCGTGCAAGCCTGTCATTTGGAC ACAAAACTATGATGCGCTGCTGTTCGAGTGGAGCCAACGCGGGGATGTGAACCAAGTGCTCGCGCTCCTCGACGAGATGGTCGCGTTCAATCGCGTAAGC ACGCGCAGCTTCAACACAGCGCTGGTGGCGTGTAGTAAGAAGCGCAAGCTGAAGCAAGCGGCGCACGTGCTCCAGCAAATGCGCGAGGCAGGCAAAACCC CGGGGCCGTTCGCGTACGCAAATGCGATCAACTGCTGCTCCAAGGGCGATGGGAATGTGAAGATGGCGACCAAGTTCTGGAACGAGATGCTGCATGATGG CGTGGAGCCGTCTATCGAGGTCGTGAATTGTATGCTGCGCGTGTACAACCGAGCGGGCGGTCGCTCCCATGAAGCGCAGGCGCTGGTGCTCCAGGCGATC CACACATTTGATCTGACTCCCGACGCGATTTCCCAGTCGGCGCTAGTATTTTCGTTGCTTCAGGACGCGAAAACGGGCGACGCAGTGGATTTCCTAGAGG AAATGCACGAGCAAATGCAGGTGAAAGTTGAAATCGACCTGCTCAACGCCACGCTCGACGCCTGCAGGCAGCTGGAAGACTGGGAGAATGCAGCGAGAGT GCAGCATCTGATGCAAGGATCACAAGAAAACAACAGTGGTGGCAGTGGCAACGCTGTCACAAAACGGTTGGTTGCGCTGTGTGAAGTGAAAGATGCATCA TCGCCCGCTGTAGCGTGGACATTTGCAGCTCCGCATCAACTTCCGATCTCTGCACGAGCCAAGCAGAACGAGATGGTAAAAAAGGAGAAGCAGAGCCCAG AAAAGCTGCGAAGAGTCTTCCGTGAGATCATAGCCACACTGGAGAATGGGTGTGAAGACGGCGAAGGTGCGTCGTCGATCCTGAGAAGAGTCGAGAACCT GAAGCAGTGGGAGCGGATCTTCACGTCGGCTCTGATTGAAGACGTTGAGAAGTTCATGTGTTTGTGCCAGAAGCTGGAGGCCAACAACGAAAACAGCGAG GTTCTACTGGGAGTCGAGTTCTATAACCTCTATCTCTTTGCGTTGTCACGACACGCTGGTAGAATCGAGACGGCGCTCAGCACGCTGGACGAAATGATCG AGAGGCAGCGTGTGGATGCGACGAGCTTCAACAACGTGCTAGCGATGTGCAGTCGACATGGACGACTCGAGTTGGCAGAGCGAGTGCTGGAGAAGATGAA GCTTGCGGCGCGATGTACGCCGTCGACTTTCTCCTACAACGCGGTCCTGAATTGCTGTGCGCTTAAGTGCGATGTGCCTAAGGCAGAGCGCTACTATGCA AAACTCAAGGCTCGCGGGCTTTCACCAGACGCAGTCACCATCAACACGATGCTGAAAACTTATGCAAGCATGACGAAGAAGGTGTCTCAGAGACACCATC TAGACCTACGAAACGAAGAAGAAGGAAAGCCGGAAGGACTCAGCTACGCCCACCGTGCGCTCAAGCTCTTCCAGCGAAGCTCCAGAAAGCTCAAGATCGA ACCTTCGAAAGCGACGTACTTCTCGCTTTTCCGCGCTTTTGTGCAGGAAGCAGACAGGATCACTGCGTTTGAGGAGGGCGCAGAGGAAGACGGAGACGGT GATAATGACGAAGGGATCCACGACCAGATCTCTTTATTAATCAAGCGAGTTTGCGTCGACGCGCCTGTGAAAAACCTGGACGTCGCAGTGTTTAACGCCG CGATCGACTACTTCCAGCGCCTGGGGGACATGAAATCGACGTTCGACTTGTTCAACACCATGAAAGAGAGAGGCTTCGAGCCGAATGACATGACGCTGAG CCTGCTGTTTGCCGTGTGCAGTCGCTCGGAACAGATCGACGTGGGGCTCAATTTTCTGCATTACCTCATGGACGAGCAGGGCTACAGCCCGACGATCGAC GTGCTAAATGGCGCGATCCAGCTGTGCGCCAGCTCGAGCTCTCCGCACGATGCACTGGAGCTGTTCAACGGAATCCAGTCGTCGGGTCTTCTAAAACCAA CTGAAGCCACATTTGTGAACCTGATCCACGCGTTTGGCCGCCAGGGCGATGTCGCGCAGGCGCTCGAGTACATCCATGCGATGAAGCAGCAGCTTGGATT TGCCTCTCTTGACGCGTACAATCGCGTGCTTCAGGCGTGCGCTGTCAACAGTGCGTCATTCCAAGCAATAGACGTGTTGCAGCACATGCAGCAGCACGAA GGGTTGATTCCGAACGCTGTGTCCTACAACATGGTGCTCAAGGCGTTCGCGAAGGTGCGCAGACAAGCTGAGGATGACGAGAGCGATGACGAGGGCGATG ACGAGGGCGATGACGAAGAGGACGACCAACAAAGTGGTGACTTTGATGATGACGACCAGAATTTTGGAGCTGCTGGTGAAGATGCTTTTGACAGTGTTGA AAAAGAGGAACCTGAATTTTTCAACGTTGCTGACGCCGAAACTCGTCGCGCGGAGGCTGAAAGCGTGCGGAATCTGTTGGTGGAGCTCCTCGACGAAATG CAGAGCAATGGCGTCCCGCCGTCTTCGATCACGTACACGCGCGTGCTCGCAGCGTGTGCGCTGCGTGGGGATACCGACGGAGTGCTCCAGTTTGTTGATG AGCTACTACACAGCAAAAGCAATGGCCGCAGTGCATCCAGTGAAGTCGTTGAGCTCCTTTCCGAGTCGAGTCTCCAGAACTACCTGAAAGCCTGCAGCCG CGCGCGCAATCTTGATCGCGTGATGCGCTTGATGGGCATTCTCCAGGAGTGGCATTCGGAGACTGGCAGATCTGTCTCGCCGCGCGTAATCCTGCAGCTA CTCAACACGCTGGATGATCTGGGGGCGTGGCGCCGCGCGGTGGTGGTGTTGCGTGACGTGGAAGCGACCTATGGGGTGCGTCCGAACGTGGTGTTTTTCA ACCGCGTGATGGAAATGTGCAATGCGGCGAGCGAGTTCCACTTTGTGGACCAGATCTTCTCGACCATGCGGAGCGCCGCCGCGTACCGGATCTACCCGAC GTCGCAGAGCTACATTGAAGCGATCTACGCTGCCGAGCAGCGCGAGGCGTGGGTGGTGGCGACCAATTTGTTTCTCGAGATGCAGAAAAAGTGTGCAAAA GATGAAATTTCAGCCACACAACTACAGAAAATCGCACTCGGGCGGTACAGCGAAGGCCGCCACAAGCTGTAG |