/usr/amritdata/protein/develop/executables/log_for_browse/loglikelihood -s /tmp/images/bd_sequence_input_file_9514745ce8cf98d94cb3f365516ab758 -m /usr/amritdata/protein/develop/executables/log_for_browse/matrix/1642459 -w 120 -web -o /tmp/images/bd_log_output_file_9514745ce8cf98d94cb3f365516ab758
Transcript Name :
Phyag_g4
Location :
Scaffold_1 : 8407 - 9367
Orientation:
(-)
Number of Exons:
5
Description :
elongation factor P, putative
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
HmmSmart predictionP-Valprediction_id
Elongation factor P, C-terminal5.4SM00841
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-208
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
Biological ProcessGO IDPrediction Method
cytoplasmGO:0005737IEA
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        961 bases(100 bases per row)
ATGCTGCGTCGAGCAATCACGCACGTTGCGCGGACGACGGCGCCTTCTCGTGGCTGCGGAGTGCGCTTTGCCACGATCAATGGTACCATCCTGCTCAGCA
CCCGACGCGCTCTTTTCTCATATCAGTTTCACCGTTTAACTCATCGAATTGACTCAATTGAACAGGTAATCAGGTGCGAGCGGGTATGGCACTTGAGATC
GACGGCAAAATCTACCGCGTGGGCAAGAATCAGCACGTGAAACCTGGGAAGGGCGGAGCTTACGTCCAGGTGTATACTTTGTCCGTGGAAATCCACGCAA
AATAATCGGATAAACAGCTTACCAGAAGCGTGTATCAATGTCAAATTGCCGCTGTTAggcggagctgaaggagataAAGACCGGAGCCAAGATGAACCGC
CGCTTCCGTGCTGCTGAGAGTGTGAACAAGGCGCCGCTGGGTCCGGATGAGCCGTTCCAGTTCCTCTACTACAACGGAGACCACCTCGTCATCATGCACA
ACGGGACGTTCGAGCAGGTGCgggactgctgctgtgctttagtgtcgttgaagctggacaaTCTAGTAGAGAAATTAATCCATCGCTGCCGGTGTCGCTG
TagatggagatcgagcgcGACCTGTTCTCGGGTCGGCAGCTGGAGTTTTTGCAGGAGGGCatgacgctgtcgctgcagatcGTCGAGGGCGACGTGCTGT
GGGCCAACATGCCCGAGTACGTTACGCTCGAAGTGACGGTGCGTGCAGTTCGTGGTCCATTTCTCTGGTCGGAGGTCTGGCTCTGATTAATGCCGTTATT
TCTCGCAGAAAACCACTGCCAAGGGCGTGGCGGACACGGCATTGAGCGTCAAGgacgcgacgctggagaacggCGCTGTGGTCAAGGTACCACTGTTCAT
CGAGGTCGGCAACAAGGTCAAGGTGAACACGGAGGACGGCGCGTACGTCGACAAGCTGTAG