/usr/amritdata/protein/develop/executables/log_for_browse/loglikelihood -s /tmp/images/bd_sequence_input_file_3ae59bbaf6a9d9b24e324ea291c28ff8 -m /usr/amritdata/protein/develop/executables/log_for_browse/matrix/1642459 -w 120 -web -o /tmp/images/bd_log_output_file_3ae59bbaf6a9d9b24e324ea291c28ff8
Transcript Name :
Phyag_g16
Location :
Scaffold_1 : 64285 - 67890
Orientation:
(+)
Number of Exons:
1
Description :
phospholipid-transporting ATPase, putative
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
fprintscan predictionP-Valprediction_id
Cation-transporting P-type ATPase4.7PR00119
Cation-transporting P-type ATPase4.7PR00119
Cation-transporting P-type ATPase4.7PR00119
Cation-transporting P-type ATPase4.7PR00119
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-284
353-889
944-972
1028-1038
1099-1201
308-329
910-923
996-1004
1062-1075
285-307
330-352
890-909
924-943
973-995
1005-1027
1039-1061
1076-1098
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
Biological ProcessGO IDPrediction Method
integral component of membraneGO:0016021IEA
cation transportGO:0006812IEA
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        3606 bases(100 bases per row)
ATGGGTGAAGGAACGGCAGGACACGCCGGAGACTTCCGCGTGGTTCACCTAAATGATGCACACCGCAACACTGAGGCCGGTTattgcaacaacttcatcg
tcacGTCCAAGTACACGATAGCGAGTTTCCTGCCCAAGTTCCTCTTTGAGAGCTTCCGTAAACTCTCCAATCTCtacttcctcgtcatctgCATCCTGCA
ATGCATTCCGCAGATCAGTAATACTAACGGgacgccgtcgacgttgccGCCCTTGATCTTTATCATCACGGTTGATGCCGTCTTTGCCATCCTCGAAGAT
CATAAACGTCACCAGGCTGACAACATCGCCAATGCAAGTCCGACACTGGTCTTAGACCGCGAAACGAAGAATTTCAAGCAAATCACGTGGGCGGACGTCG
TAGTGGGCGATATAGTTAAGGTGACAAACCGAGGTCTCGTGCCAGCAGACATGCTCGTGCTAGCAGTTAGTGAGATCCCCAACCAACCCCCGTGCGGTAT
TTGCTACGTTGAAACCAAGTCTTTGGATGGAGAGACCAATATGAAAGTTCGTTCTGCAATGGAGGGCACGTTGGCAGATATGGGTTCTGTCGACAACTTG
CTCAAGATGAAAGGTGTTGTCCGTTGTGAGCATCCCAACAACGCCATCAACAGCTTTCAAGGCGTAATGGAGCTTGAAGGCAAAGAGAAAGCGTCCATTC
CGTACGAAAGCATTATTCTTCGTGGTTGTATTATTCGTAACACGGAATGGGTGCACGGCGTGGTCTTGAACACTGGCAAGGACACGAAAATTATGATGAG
TAACTCGGCTCCACCGTCGAAAATGAGTTCGATGGATCGGTCTATCAACCAGTACACTGTCGTGTTGCTGACGATTTTGGTCCTATTCAGCGCAGCTGGC
GCAATAGGCGCAGTGATTTGGAAAGCAAACCACGATTCCGTGTGGTACTTGCAGCTTGGTGTGTCCGACAACAGCGTATTCGTGGATTGGCTCATCATGT
TGTTTTACTACCTGCTACTCATGTACCAGTTCGTTCCCATTTCCCTGGCTGTGTCCATGAGCATGGTCAAGTATCTCCAAGCTCAATTTATTCAGTGGGA
TATCAACATTTACCACCCGGACACGGACACTCCGACACTGGTGCGTTCCATGTCACTCAATGAAGAGCTCGGGCAGATCTCGTATATATTTTCCGACAAA
ACAGGCACCTTGACATGCAACGTCATGGAGTTTCGGAAATGCTCGATCGGTGGAGTTTCTTACGGCAACGGAACCACAGAGATCGGGTTGGCAGCTCTCA
GGCGCGCTGGTAAACCTATCCCAGACATGACTGCCCAGTCCAAGGGCCCTAAAATTCCTTACGTGAACTTCGACGGCCCCGAATTATTCAATGACATGAA
AGGGGACGCGGGCTCTGCTCAAAAGGGGCGGATCGATGCCTTCTTCACACACCTTGCGGTATGCCATACCGTCATCCCAGAGCGTCACGAGAACTCCACT
GAAATCACTCTATCGGCTTCATCACCCGATGAACAAGCTTTAGTTGCTGGTGCGGGATTTTTCGGGTACGAGTTTGTGAACCGATCTCCTGGTATCGCGC
ACGTCAAAGTTCGTGGCACGGTTAAAAAAtacgagatgctggacgtgttAGAATTCAACAGCACGCGAAAACGCATGAGTACAATTATTCGTCACCCCAA
TGGACGAATCTTCTTGTACTCCAAAGGTGCAGATGTAATCATCTATGGGCTTCTGGCAAAGGACAAAGAAGATGAATCGATCTCTTCCCAGCTCCAGGAG
ATCACCCGACGACACATTGACCAGTACGCTGAAGATGGACTTCGTACGCTCACGATTGCAGTTCGTGAAATCGAGCCTTCGTATTACGATGAATGGGCGT
TGCGCTTCCACGACGCGCAAAACAATCTGAACGAGAttgacaagcgcaagaaggatCTGCCGAATGCGATAGATGAATGTATGAGTGAGATTGAGTGTGG
attggagctgcttggagcCACTGCAATCGAGGATAAGCTACAATCCGGTGTTCCCGACACGATCGCCAACTTGGCATGCGCAGGCATTAAGATCTGGGTT
CTCACAGGCGACAAGGAGGAAACTGCGATCAATATCGGTTTTGCCTGCCAGCTTGTTACGAACGACATGAAGCTTTTCATCATCAATGGGAAGAATGCGC
CGACCCCAGAGATACTTGAGAGCACATTAAGGGACGAAATTGGAGCTCGCTGCGCTGATGTCACCGTTTACCTGGCCTCCCCACCGAGCAAGAGAAGTGA
GCTGCGGGACCTCGCTTTCGTTATCGATGGAGAGACGCTCATGTACGCTCTGCGTGGAACATGTCGCCCACTTCTTGCCGAGTTTTCGCAGTACTGCAAA
GCTGTTATCGCTTGCCGTGTATCTCCCGCTCAGAAAGCCGAGATGGTTGCCCTGATCAAAGAGTATGTCCCTGGCGTCCGAACGCTTGCAATTGGAGATG
GAGCAAACGACGTTTCCATGATCCAAGAAGCTCACATTGGTGTTGGCATttctggccaagaaggcatGCAAGCTGTGAACTCGAGTGACTACGCCATCGC
CCAGTttcgcttcttgcagcgcttGTTGCTTGTTCACGGTCGATGGAACTACCGACGCATGGCACAACTTGTGTTGTACATTTTTTACAAGAACATCCTT
TTTACCGCGGCACAGTACTGGTACACGCTGTTGTGTGGGTTTTCTGGGGAGAAGTTTTTCCTTGAAAGCGGCACGCAGCTGTACAATATCGCTCTGACTG
CGATTCCCATCGTCGCAGCGTCGATCTTGGATCAAGACGTCAATGATGATGTCGCCATGACGTTTCCAAAGTTGTATTTCACAGGACCCCGCGATGAAGA
CATCAACACTCGCATTTTTTCCTTGTGGGTTGTCGGAGCGATTGTCGAGAGCCTCATCATCACGTTCATTACGATTCACAGCGTACAGGCAGCTGGGTAT
GGTGGAGGTAGTCCTTCAATGTGGCTGGCGGGCTTTATCGTCTTCACTCTCGTCGTGACGGTAGCCAACGCAAAGTTGTTCATGTTCCAGAACAGCTTCT
ACTTCTTCAATTACTTCCTTTACTTGGGTTCTGTGTTCGTGTGGATCGTTGTCGCAATGGTGTGCAGTCACGTCACACTCCTCGCTGATCTCACGTGGGA
GCTCATGTTAGAGCAGGCGTTCGGTCTTCCATCTTTCTGGTTGATCTGCTTGTTTGTCCCAGTAGCCGCCCTTTCGTACGCCCATCTTTTCAACGGCGTA
AGATCGACTTTCTTTCCGGAGTATTGGCATCTTGCCAAGGAGGTCATCAAGTTTAATCTTGATCGCAAGCTTCTGCAGTGGAACGATAATAGCAACGCGT
CGGTGGCAGTACCAGCTCGATTACCGCACGCAAAACGATCTGCCAAGAAGAGTAGCTCAGTTATCCCAACTGACAGccgaatgcagcagcacagaaCCAC
GCTTCAGAAGGCATATCACGGGTTTGCCTTCTCCAAAGATGGTTACGCCGGGGCAACAGAAACTCGGCTGCTCATGAGTCGTAGCTCCATCACAAGTATT
AATTAG