Transcript Name :
Pytiw_DAOMBR242034snap-piw_contig_2270-abinit-gene-0.10
Location :
Scaffold_2270 : 34 - 2682
Orientation:
(+)
Number of Exons:
2
Description :
Conserved gene of unknown function
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
Profile scan predictionP-Valprediction_id
Zinc finger, C2H29.494PS50157
HMMSMART Prediction
HmmSmart predictionP-Valprediction_id
Zinc finger, C2H2-like25SM00355
Zinc finger, C2H2-like0.22SM00355
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
Interpro Domain nameprediction_id
Zinc finger, C2H2-likeIPR015880
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-763
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
Biological ProcessGO IDPrediction Method
metal ion bindingGO:0046872IEA
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        2649 bases(100 bases per row)
ACGCGCGACGGACCGGACCTGAGCCAGCAGAAGATAGACGCCAAGAACGAGAAATGCCAGTTCCACAACTGCCCGAACCGCGCGCGCGTCTCGCAGGCCT
ACGGGAAGTTCTGCAACCGCCACGTGATCGTCGCGCCGTGCGGCTTCCCCGGGTGTCGCGACAAGGCGCTCCTGAACGCGTCCATGTGCGAGAAGCACCT
ACAAGAAGGCAAGGACGCGCTGCACAAGGTGCTGGCCACGCGTGCGCAGAACGTGCCCGTGTGCCGCACGTTTGGCTGCTTCAAGAACGACCAGGGAAGA
GGCTACTGCCGCGGCCACGAGAAGCTCCTCATGGCTACGGGTCGCCTGCCCAAGCACGTCAACAAGCGGCGCCTCAACAGCGCGTACACGATGTGCAGCT
ACCCAGGTTGTGACAAGCACTCGCAGCGACACCACCTCTGCCGGACCCACGGCAACCTGATCTCGAAGCAAGCCGAGGAGCTCCACACGCGGTCCAACGG
AGAGACCTACGAGGAGATTCTGCTGCGGCTCCAGCAGAATGTGCGCAAGTGCACCAACCCGACGTGCACCAAGAACTCGCAGCGCGACCGACTCTGTACG
ATGCACTACTATGAGAAGCTCAACCCGCCGGCTGATGGAGCGAGCGGTGACGCCAACTCGGAGCAACAGAGCGAAGTCGCCGCACCAGCTCCGGGAACGG
AAGCTGCGCCAGTATGCAGCGTGTCAGATTGCAACATGCAGGCGATGACGAAGGGTGTGTGCAAGTATCACTCTGGACAAGGACAAAATACAAAGAAGCA
GCCTGTGGGGAGTGACGCGGCCACGGCAGCGGCGGTGAGTGGGATCCGAGAAGTCGAGCCAACGCGGTGCAACGTGGCGGACTGTGTCCAGGTGTCGTAC
TCTTCCGGGATGTGTCTACAGCATTTCAACCAACATCGACAGCAACTGCAGCAGCAACAACGACAGCAACAGCAGCTGCTCCAGCAACAACAGCAGCAGC
AGCAACAGATGCAGCATTATCAACATCAGCAGCAGCAGGAGCAGGAACGAGGACATTCAGTGCAAGGAAGCAGATACAGCAGCAGCGTGATCTCACCGTT
TGGAGATGACCGCTTCAACACGCCTATGGACCCGACTCTTTCAGCACGGCCCGGCATGGAGAGCTATTATCCTGGTGGCGGCGCGTATGGGGCACCGATG
GATCCAAATATGAGCAGCTATCCACCGATGAGCAGCTCTGAGAGACACCTCTCTGGACCTGGACCATCGGGTGGTGAAAGCGAAGCCAAGCAAGCGCTAT
TCAGTCTCAATGCGAAGCTGACTGATCCCGGACGAGCCTACAACCCGCACGACGAAGGTGGTGTGTATCGAAGTGGCTCGGTGTGCAGCAATCTGATTTG
CAATCGGCAGACGTATGGCCGCGAGTACTGCGACTCGTGCCAGAGCATGGTCCCTCCACTCGTCGGCGATTCGCTATCTGGAGGAGGAGGAGTTGGGGCT
TCCTCGTATGCCTACTCAGCGAGTGCCCAGCCGGATCCCGAGACCAGTCCACAAGGTTGGGGAGACGCAGCGCCTCAGACGAAGCTGCCGCTCGCAAAGG
CGTATGAAGTCTGCCGGGTGGGTCAATGTGGTGCGATCGTCCCGAGCCTCGCGAATGGAGGTCTCTGTGATCTCCACTTTCGCTCATTCGAAGCCGGCGA
TCTGTCAGTCGACGAGCTCATGTTGCGGTCCAAGGTGCTCGAGAAGGAAAACCACGCTAGCGCTGCGGCGGCGGCTGGCGGCAACAAGAGTCCAACTGGT
GGCAAGGGGAGGAAGTATTTCTGCAAGACTGATGGCTGTGGCAAGCAAGCGCAGCGCAAGGGTCTCTGTAAGAGGCACCTCCGTCTTCACGAGCAGGAGA
CTTCAGCGAAAAAGGCGAAAATAGACTCGGCGAGTGACTTTGCTTCCCCGAACCAAGCGAGTGCTGTCATCAGTCAGGCAACCTCGACACCCTGCCGCTT
TCCGAGATGCAGCCAGCTTGTTGGCCGGAATGCCCCGTGGCTGTGCACTGCTCACGCGAACGCAAGCTTCTGCTGGCAGCCTGGCTGCGAGAAAATTGTC
GACGGGCCCCAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCGCTGC
AGCCACGAACACTGTGACAAGTTCACCGTCGGGACGACCGGTGTGCGCTGCCGGCTTCACCAGATCAGCTGCAAGGAAGAGCCCTGCGCGCTGTGCGAGC
TACACGGTCTCGGCTCGGAGAACGTCGTCGTCAGTAGCAGCACCACCAGACGACCCGCAACGCCGCGAGATCGCACTGGAGCTGGTGGCAAGGGCGGCAG
TCGGCGGAAAGCCAATTCCGAGAACCTCCAAGCTGGCGGCAACCAGTAA