/usr/amritdata/protein/develop/executables/log_for_browse/loglikelihood -s /tmp/images/bd_sequence_input_file_a7517b2031238ecc22b9e6b3134426b3 -m /usr/amritdata/protein/develop/executables/log_for_browse/matrix/1223556 -w 120 -web -o /tmp/images/bd_log_output_file_a7517b2031238ecc22b9e6b3134426b3
Transcript Name :
Pytar_ATCC12531fgenesh_masked-par_contig_1-abinit-gene-1.21
Location :
Scaffold_1 : 102952 - 105854
Orientation:
(+)
Number of Exons:
7
Description :
Isoform 2 of Uncharacterized protein CXorf57 homolog
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-769
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
PositionContextScore
234AWNRRRR|YC0.715
265HVNRKKR|LA0.758
434HRHRPHR|DG0.511
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
*** None ***
Pathway
*** None ***
Ortholog
*** None ***
Sequence
        2903 bases(100 bases per row)
ATGACGGAAGCGGCCTTCATGACGCCGCCTGCGCGACGCGCGCGCCAGCAGCGCACGAGTCTGGGCAGCGTCGCCAGCAGCGGCAACAGGAGCAGCAGAC
GCGGAAGCAGCTTGCTGGGCAGCGGCACCGAGAGCGAGCTCACGCCCAGTGGCACGCAGATCCTTCATGCCGGACTCAAGCGCACAGGCCGCCCGCTCAC
GCTGCAGGTGCTCGGCGTCTACCGCTGTACGTATCTCTGAGCAGATCTCCGCCACGCGCATGTGGTCATATGCAGGGCACTGAATCCGTGCACTGTATTA
GATGTCGCTGATCCCGTGCTGAGAGGCGTACTCCCGCCGGAAGCCGCGGAGGCACTCGAGTGGGACGTGTTTGATTTGGTCGTGAGCGACGGACAGATGA
AGATGAAGGCGATACTATCGCCGGCACTCAACGACCTCGTCTGGCGCGGCCTCGTGGGTGAATTGGATATTGTAGAGATTGATGATTACGAGCTTCTCAC
CATCCACGACGACGAGGACGACGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAGCCACGCAGCGTCTGCATTATC
AACGAGCTAACGCCACGAGTGCCACTGCTCACCGCCTCCCAAGCAGACGATGACGCGTCCGAGAATGCGCCAGCCTCCCAATCGACGATCCCAGCGCCAC
GTGCCAAGATTGTGTACTCTGTGGGCAGTGCGCTGCTGCCGTCACCGCTCGTGCACGGCAGTGCCTCGGGCGTACCTGACCTGCAATTCATCTCAGAGGC
CCACATTCGCGACCACGGTGCACTGCCGCTCGCGGGCAAGCGGCTCTACTACCTCTCACTGCTCTCGGACGACTACCCCGCCGACTGGGAACCCGTGCAG
TGCGAGCCGCTCACGCCCGTCTCCCGTGCGACGCCGTGGGCCGCGTGGAATCGTCGGCGACGGTACTGCACCGACATTTTCACGTCGCAGGACCGCAAGG
TCCACACCATCCGCGAAGTGAATGTGATGACCAGCCACGTCAACCGCAAGAAGCGACTGGCCAGCGAGTTGGACGAGGACAGCGAAGCCCAGCCATCGAC
CATGACGCCGCCACCGATGATCGGCATCGTGCAATTCAAATCTGCGCTCGTCCACACGGGCGCGCCGAACGTCGTGAACGAATTTCCGTTCATGTTCCAC
ATTGTGCTCGGTACGTGCGTGCGAGAACGAGGGCAGTTACGCCTCATGGATCTCTCTGACATTGTGTGCGTGTGCAGCGGATCGCGAGCGGATGGTGGCG
GTGGCGTTCTTCGGGTCCATGGCGGCCATGCACTTTTTGGTCGTGCAGGAGGGAGACGTGGTCCAGCTGCAAGGGTACTTTGTCACGCGGAGTGCCCCGC
GCGATGATGAAAAGTCCAAGAAGCTCTTTGTCTTCCCCCACAAGTCAACGGGTGTCGTAAGCCTCGTGCCAGGTGCGGTGCTGTGGACGATTAATACCCA
GTGGCATCCTCTTCACACATAGTGTTTTTGATTCAGACAAGTACTGGAAGCTGCTCGAGACCATGCAAGTGCTCGAGAAGCGGCCACGCCCAACGCCGAG
CAGGGAACATGGTGACCACGACCTCCACTCTACAGTGTGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTGGAACACGCTGCACACTCGAGA
CGTTAGGATGTCAGCTGAAGAAGCTGATACGACGCACTTTGATTTCGTGGGTGTGGCGTCTTTCGTCAGCCGTGTGCATCGCCATCGCCCCCATCGCGAT
GGCTCCATCGACGCCAACACGGTCGCGTCGCTCACGGCGTATCGGTGGCTCAAGGTGATTGACGCCCACAGCACGAGCGAACTGGTCGTGCGGCTCTATG
TCAACTCGCAACCGACAGCATTCCATGCGATCCAAGCGGGCGACATGGTGCTGCTATCCAAGCTTAAATGGGTCCACCCCCACAGTAGTGGAGGGGGCAT
GGCATTTGCCAGCAGCAGCCCGTTCACGACGATCCGACTGAACGACGTTATCGAGCCATACCAGATCTTCTCCGCGTGCTCCCAAAATGTCGCATTTGCC
AAGGAGCTCCAAGCAAGCGGCGGGTGCAGAGCCCATTACTCGCCACTCGGTGGAACCACAGAGAGCTGGCTCGAAGGCCCCGCGGTCCACGACTATGAGC
CACTCCACTCCGTCATTTCGATGCTCGACTCGGTGGACGAAACGCTGACGATACTGGCAGACGAAGACTCGGCCGACGTGGACGACCCGCGGCAACACTG
GATCCCGATGTTTACCCCGGACGAGCTCGGCGTGTACCCGTTCGAAGACGTTGCGGCGATAGCTGAGTCCATGGACGCCATGTCCCACCAGTACATTCGC
GTCCACGTCGCGCTCCACGACATCCGCGCGGCGCCTAGCCACACGAAAGACGACGTCGCCGACATCGAGTTTCTCGTGACGGACAGCAATCGCCAGAGCG
AGCGCCCGCCGCAGCTGCTTCGTCTCCGGTCGAACCTGCTCTTCCGAGAGCCCGCGCTACCGAGTCCGCTGGACGAACTGGTCGCGGCCGACGCCGAGTC
GCTCGCGCGGTTGCTCACGCCGTCGGCGCTCGAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCGACGGAGCTACCTC
ACTTCAGTCCGGCCAAGGCACCGCTCCATTCGCCGGCCGCCGAGTCGGACGAGCAGCAGATCACGCTCGCGACGGTCAAAGAGTATATCCTCAAGAGCCG
ACAGGGCGGGGGCGTCGGCGGCATTGAAGTCGCACTCCATCTCTACCGCCTGCCACAGGGTGGACTCGATCTATGGATCGACGGCATCAGTCTCGAGGGC
TAG