Transcript Name :
Pytar_ATCC12531maker-par_contig_1-snap-gene-1.10
Location :
Scaffold_1 : 106104 - 107122
Orientation:
(-)
Number of Exons:
3
Description :
Casein kinase II subunit beta
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
fprintscan predictionP-Valprediction_id
Casein kinase II, regulatory subunit1.4PR00472
Casein kinase II, regulatory subunit1.4PR00472
Casein kinase II, regulatory subunit1.4PR00472
Casein kinase II, regulatory subunit1.4PR00472
Casein kinase II, regulatory subunit1.4PR00472
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
HmmSmart predictionP-Valprediction_id
Casein kinase II, regulatory subunit1.2SM01085
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-304
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
*** None ***
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
Biological ProcessGO IDPrediction Method
protein kinase CK2 complexGO:0005956IEA
Pathway
KO ID
K03115
K03115
K03115
K03115
K03115
K03115
K03115
K03115
K03115
Ortholog
*** None ***
Sequence
        1019 bases(100 bases per row)
ATGAGCAAGCGCGGCGCGCAGCGCGAGGGCGCCGAGATTGAGCTGCTGGAGGAGGAGATCGGCGGGCTGCGTCTGGGGGGCGGTGCCGACGCGGCCGGCG
GCGACGACGAGTTTGTGAGCAACTCGTCGATCGACTCGAGCGAGCTGGAGGAGGACGAGGACGAAGAAGAGCTCGAGGACGAAGACGGCGCCGAGGACGG
CAGCGAAGAAGAGACGAGCTGGATCGCGTGGTTCTGCTCGCTGCGTGAAAACGATTTCCTGTGCGAAGTGGATGAGGAGTACATCGAAGACGACTTTAAT
CTCACGGGGCTCAACACGATCGTGCCGTACTACGACTACGCGCTGGACCTCATCCTCGACATTGAGACGCCCCACGGTGCGGTGCCTCGTCGTTTCGTGG
AAGAAAACTACTACTCATTCTAATACTCATTCTAATACTTTCCATGCATGTGCAGACCAGAACCTCACGCAGATGCAGCAAGAAATGATCGAGTCGGCCG
CCGAGATGCTGTACGGACTCATCCACTCGCGGTACATTCTCACGACCAAGGGCATGGCGGCCATGCTCGAGAAGTACCAGAACGTCGACTTCGGCCGGTG
CCACCGCGTGCACTGCACGGGGCAGCCCGTGCTGCCCGTGGGCCAGTCGGACGTGCCGCGCCACACGACGGTCAACGTGTTTTGCCCCAAGTGCCGCGAT
ATATACTTTCCCAAGTCGCAGCGCGCTGGCCGTACGTTTGATTTATTGCGAGGGAGAGAAAGAGACCCATGCAACTGACGGTGGTCCGTGCTCTATAGAA
ATTGACGGCGCGTACTTTGGCACGACGTTCCCGCACGCGTTTCTGCTCGCGCACTCGCATCTCGTGCCATCGCCGCCGACGCAAGCGTACGTGCCCAAGA
TCTACGGCTTCAAGGTGCACCCGACGAGCGAGTACTACACGGGCTCGACCACGACGAAAGCAGATAGAAGCAGCCACCGCCGCGGCCGGACACGCGTGGA
CCGCATGCTGCGCAGCTAA