/usr/amritdata/protein/develop/executables/log_for_browse/loglikelihood -s /tmp/images/bd_sequence_input_file_f4762e6f12aaa12edf4a882dc6679d65 -m /usr/amritdata/protein/develop/executables/log_for_browse/matrix/1223556 -w 120 -web -o /tmp/images/bd_log_output_file_f4762e6f12aaa12edf4a882dc6679d65
Transcript Name :
Pytar_ATCC12531maker-par_contig_1-fgenesh-gene-0.5
Location :
Scaffold_1 : 70444 - 72327
Orientation:
(+)
Number of Exons:
2
Description :
Beta-catenin
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Analysis
Gene Model plot
Functional Annotation
HMMPFAM Prediction
*** None ***
SUPER FAMILY Prediction
*** None ***
FPRINTSCAN Prediction
*** None ***
PROFILESCAN Prediction
*** None ***
HMMSMART Prediction
*** None ***
HMMTigr Prediction
*** None ***
HMMPanther Prediction
*** None ***
Gene3D Prediction
*** None ***
InterPro
*** None ***
Signalp -- Signal Peptide cleavage Site
*** None ***
tmhmm -- Prediction of transmembrane helices in Proteins
InsideOutsideTMhelix
1-558
SECRETOME -- Non-signal Peptide Protein Secretion
*** None ***
PROP -- Proprotein Convertase Prediction using PROP
PositionContextScore
33GSARSKR|RR0.715
PSORT -- Prediction of sub-cellular localization
*** None ***
GO
*** None ***
Pathway
KO ID
K12864
Ortholog
*** None ***
Sequence
        1884 bases(100 bases per row)
ATGGACGACCACTTCGCGCGCGTGCTCGCGGGCCCCAAGCGCGCGGCTGACGACGCTGATGCGGCTGCTGACGCGTCTGGTTCCGCTCGTAGCAAGCGCC
GTCGCGACACGTCCGACGACAACCGCGCGCGGGTCGCCCAGGTGCTGGCCCAGGGCGACGCCGCGGCGCAAGAGATCGTGGCGCTGGACGCGCGCGCGCT
CAAGACCATGGCCCACGCGCTCGACAAGGCGATCCGCCGCAACGCTCTAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCAAGCACAGCGACGAGCCGGCCAAGTTTATGGAATCGGAGATGCAGCTCGACGAGGAGCTCA
CCAAGTGGAAAGCCGTGGCCGCCCAGCCCGCTCTCTACGCCGAGCTCGTCGAGCTCGAGGTCGTGGCGTCGCTGCTCGGGTTGTTTGGCCACGAGAACCT
GGATATTCGTCTGGACGTGGTCAATCTGCTGGCCGAGCTCACGGACGTGGACGAAGACCCGTCGGCGCTGGCGCCCACGACGCGACTCGCGACGCATTTG
GTCGCGCACGACTTTGTGCCGCTGCTCGTCAAGACGCTCGACGATCTCGACCGTGACACGCAGGACCGCGCAGAGGCAGAGGACGACGCGAGCGGCACGG
GCGTGTTCCACGCGCTCCAGATCGTTGAGAACATTGTGGACGTGCTGCCCGACTCGGCCGTCACGCTCGGTGCGTCGACGTCGATCTTCTCGGTGCTGCT
GCGGCTCGTCTCGCCCAAGCGAACGTTTGGCTCGACCAAACTGTACGCGAGCGAAGTGCTGTCTATTCTCGTGCAGGCGGACGGACGCAACCGCGAGCAA
TTCCTATCCAACACACAGGACGATGACCGGCTCGACCGCTTGCTGCAGGCCCTTGCGCCGTACCGGAAGCGAGACCCTCAGGGCGACGAAGAAGAAGAGC
TCGTCGAGAACCTGCTCAACACACTTTGCAGTTTGCTGTGTGAGACGCAGGGCCAGGACCGCTTTCGACGCCTCGAAGGACTCGAACTCATGCTGCGTTT
CATGAAAGACCGCAAGCAGTACGTGTTTTCCGGCGCCTTGCGCGTGCTGGACCACGCGCTGATGAATCACGCTCGCAACTGCGAGCGGTTCATCCAGGTC
GGCGGGCTCAAGGCGCTGTTCCCCATGTTCATGGGCAAGAAAGTCGCCAAGAAGAAAGACGTGCGCGCCAAGGAAATCGAGAATGTGACGAGCCTACTGG
CGTCGCTGTGTCTGCTGGTGCCGCAAGACGCCGACCAGGATGTCCATGCACGGCTCCACGCCAAGTTTGTCGAGAACGAGATGGAGAAAGTGGACCGAAT
CGTGGACCTCTTTGCCAAGTACTATGACCGCGTGCAAGCGGCCGTGGCGCGCGAGAACCCAGACGAAGACGAGGACCAAGAGGACGAGGACGCTGCAGCG
GACGAACGGTACTTGCGTCGACTGGACGCTGGGCTGTTTGTGCTCCAGCGGGTCGCGCTGGTGGCGGCCCATCTGAGCAAATTCTCACGCAAGCTGCGTG
CGTACGTCATGATCAAGTTCCACGAACGCAACGTCGACATCGAAGCAGTGGTCGCAGTGCTCCATGAGCAACTTAACACGCTGGAGGCCGAGGCGGACGC
GGAGACAGAGACAACGAACAGCAAAGCAGACGCGATTAAGCAGAACCAGATTCAACAGGTTCGGCAATTGCTGCAGGCCTTTGATGATGAGACGGAGATC
GAGGATGCGGCGGCCGCGGAAGAAGAAACGGGAGAAAGTGGGAGTCCAAGCGAAGCCATCAAGGAGACGGCCCCGACCGAGTAG