Transcript Name :
Phyta_totarag13096
Orientation:
(+)
Number of Exons:
9
Description :
hypothetical protein
This protein is Not Signal Peptide
This protein has transmembrane domain
Not Reviewed
Run NCBI BLAST with nr Database
Gene Model plot
Functional Annotation
*** None ***
*** None ***
*** None ***
Profile scan predictionP-Valprediction_id
Integrase, catalytic core16.48PS50994
Chromo domain/shadow11.472PS50013
HmmSmart predictionP-Valprediction_id
Chromo domain/shadow1.8SM00298
*** None ***
*** None ***
*** None ***
Interpro Domain nameprediction_id
Chromo domain/shadowIPR000953
*** None ***
InsideOutsideTMhelix
1-959
NN-scoreoddsWeighted Score
0.6161.6870.003
*** None ***
TypeScore
nuclear478
GO
Biological ProcessGO IDPrediction Method
DNA integrationGO:0015074IEA
*** None ***
*** None ***
Sequence
        4017 bases(100 bases per row)
atggaggagaacaCGACCGAAGGATTCTACGAGAAGGCGCCCCAACGACGGAAGAAACGCGGGTCTGTCGCCGGCTGGGAAGGTACATGTCAACATCGAT
GAGTGTACAAAGCGCCCAGTCCCGGGTGCGGAAAGGGCAATGTATGCAAAGGATTGCAGATATCAGTATTCAAGTGATtgccaagatcgaggtgcAGAGA
TGGGTGAAAATCAGAAACGTATTCAAGATCGACCGGCAGTGATTGGAGAAAAACCTGAGACACTGAGACAGGACCCGGACGAGAATAAACAAAATCTCGC
CGATGATTACGCAGGAGAACATGCGGAAGACGAACAGGTGTACATTAAAGAAGGAGGTGAGCTCTACGCAGAAGACCTCGAGGGTCATATGGCAGTATTA
CCGGAGAtcacgtcgacgacggaAGAAGTCACGATCGAAGATATCCAAGTGGGAAACCCTGAGGACAGCACGCcggaagagatcgagcgaCTAGTAAAGA
TCATTTGGTGTCGCCGACACCTTCTAATTGGGAAGGGGGACGCCTTGCCACCTGCTGCGAAGGGAGCGATCTGTGACGTTGATGTGGGAAATTCCAGACC
GATAGTCCAACGGGTCCGCAAGGTCGCTCCGTAATTCCGCGAAAAGTTGTTCATGCTGATCAAGGGGCTACTGTCAGCCGAGATCATCCGAcactcgacg
tcgccatgGGCGTCCCCGATCGTCGTGACCATCAAGAAGAGCGGAGTCGACATCAGACTCTGTATCGACTATCGTCTGATCAACGGCCTGACCCAACTAA
TGGTGTACCCTTTGCCTCTTATCAACGATCTACTCGACGATCTTGACAAGATCCTCTGGTATTGCTCGCTGCACCTGACTAGCGGGTTTTGGGTGGTCTC
TATGACTGATAGAGCGCGCGCGATCTCGGCGTTTATTACCCCATTCGGGCTATTCGAATGGAATCGAATGCCGTTTGGACTGAAGAACGCGCCGCAGATC
TACCAGAGGTTGGTGGACAACGCGCTGTATGGGTTCCTCAAGATCACGAGCGAGTGGCCAAGATCACGCCAACCAGACCGACGTATTCGACGAGGGAGTG
CCTGAGGAGGGAAAGGAATCGTCGGTGCTAGGTCGTCGATCTTATATCGACGACATCCTCGTGACGGCAGATTCGTGGGATACGTTGTGTGGaaaggtgg
agaagctgctagGTGCCTGTGATGAGTGGAACCTGTCGATCAGTGTCGCCAAGAGCTTCTGGGGCCTACGCAAAGTTGACTATCTGGGCCATCAGGTGTC
CGCGGACGGACTGGAAGCTCACCCGAAGGacttgctgtcgctgacCGGTCTGCCATNAGATCGCTACAGCACCAatcttgcagcacttcgatcCAGATCG
AAGACCGGTGTTGGTGGTATATGCGAGCAAGTGGGCAATTGCGGCCGCGTTGATGCAAGAACATGGGGGCGTACATAAACCGGTGACGTTTACTAGCCGG
ACGCTCAAGCCTAATGATATCGACTACGGAATCGTCGATAAGGAAGTTCTCGCGCTGCCCCGGATCTTGGATGTCTGCTACACGCAGCTAATGACGAGAT
CGGTCAAAGTGCTGACTCGGCACTCCATGTTGGCATGGCTAGTGCACTCATCAGGATTGCAAGGACGACTCGGTCGCTGGGCCGCGTTGTTGTTGAGCTG
GACcctggagatcgtcaagtGCGACAAAAGTGAGGACGCGATCCTGGGTGTAATGGCTGCGAGCATCCAGGAAACAGCCCCGGCAGGTAATTACCAGGCT
GTCACCTACGGTGGAGGCGGATGAAAAGTTGCTAGTGGTCAGCTTCGATGGATCAGCTCGAGTTAagcgaggtggaggagcgTATGGCGCCATTGTGTGG
AGCTTATCCAAATGGAAAGTGatctcagcagcgtcgcagTACAAGGACGATTTGGCAGTCAGCGAGGCGGAGTATCATGGTTTGCTCCTATGCTTCGATC
TTCTGGTCGACCTGGACAGGGACAGCTAATTATCTGCGGAGATTCGAATTTGGTCATCCGACAGATGCGAGGCGAGATCGAGTGCAAGGCACCTGGGTTA
AAATTACTACGCCAACAAGCGATGGAACGCTTGAGATCGTGGCCAAACCGCGATTTCCTTCATGGGAAGCGAGACTGGAACCAAAGCGCAGATCGACTCG
CCGGTGCCGCTCTTCAGCGTGAAGGAGGCACGGTAGTGACATCAGAGGAGGAGTTCCAAGACCTAATGACGCTTAACCGTCTTGACGAGATGCTAATCCC
ACGATCTGACAGTTCGGTGACAAAAATCACGGCCGTGACGAGATCGCGCAAGTGGCGCAGCCCAGAAGTGTTGCAGGAGAAGATTGTTCAGCGAATGAGG
GAAGATCGAATATGCATGGCACAGGAGGAAGAAAAGTGGATCGTCGATCTCAAGCAGTATCTGCGTGGGGACGTACAAGAACTTACCTCATTAGAGGCGA
AGACATGCGATAAGATCGCTGAAGATTATGAGATCGATGAGACCGGCTTGTTGTTTTACTGCCCGCCGTCCAAGCAACCGAATGAAGATCGCGATCTCGT
TGCTCGACTGGTGATTCCTGagacgctgcaagaagactTCCTACATCATTACCATGTCAGTCTGGAAGGTGGACATCAAGGAATCGGGAGGACGTACCAT
CGGATCAAGGCACATTTCCATTGGAGAGGACTGTACCAGAGTGTGCAACGTTACGTGGGTCAGTGCATAGACTGCGAGACTGGAAAAGGGAGACCAACTG
TTCGAGGTGCGTCGCCGGACAACCTACAAGCGACGTACCCATTTCAGACCATCGCTATGGACCACATCCCGTCGCTGCCCCGATCTTATAAGGGCAACAC
GGAATTGTTGATCTAGGTCGATCTCTTCACCGGCTTCGTGATCGCTAAGGCAAGTGCATCGAGAACAGCTCAAACTATCGCGGATAATTACGAAGAGTGC
GTCTTCCGACGATTTGGTGCAAGCGAAGCAATCCGGCACGATCGAGAGCCAGGCTTCATGTCGGACTTTTTCAGATCGTTCAACAAGATCATCggacaac
gacaacgagcgACTATGGCGCATCGGCCGCAAGCGAACGGTACGGCTGAACGGATGGTGCAGACGCTAACGCGAGCACTGAAGATGTACGTCGCAGACGT
CGATCAGAAGGATTGGGACGAGTATGCAGAGCGCCTCACTTTTTCTCGCAACACGGCTCACGATCGAGTGTGCGGCGATACGCCTTTCTATTTGGCGCAT
GGATGGGACCCAAGATCAACGCTGGAAGCGATGATCCCGTTAGGATCGACGCGGCGCCGAGATCGCGACCCTCGAAGGCGACGATACCATATCCAGAAGC
ATTACGAACAGGCGCGTGAGCAACTGAACGAGTACCTGCGTGAAACCATCCAGTCCAGGGCTGCTCGCCATAACGATTCCGTGCGTCCGCACGAGATCGA
AGTCGGCAGCCAGGTTTGGTTATACCTGGACAGGGTGAAGGAGGGCTACGCACGGAAGCTAGCGCACACGTGGCACGGGCCATTCAGAGTGATCGAGAAG
ACCGACGAACACGGCGTGCGACTGGAGACCGCGGGCACTACGTACAACCGCTTTCCCGTGATCCACGTGTCGAAGCTTAAGCCCGTGCGAGACTTCCCGG
ACCGTCCGCGTCTTCGGCTAGctgtccaagatcaagatcgattCGATTTTGATGAAGCCTTGCTGCCTGATGATAGCTGGGAAACGGAgcttgatgatga
cgacTACGAGGTCGAACGCATCACCGAAATGCGATCTGGACGGCGAACACGCTACGGACGAGCACTACGAGAATTTCTGGTGCACTGGAAAGGCTACCCT
GAACCAACATGGGTGGATGAAGCCGATCCCAACTATGGAGCTGTATTGCACGACTATCTGCGTGAGCAAGCCAACCGGAACCGGTTTGAGGTCATGCAGT
CGCACGAGGAGCAGTAA